Cohnella abietis: KCTCHS21_23200
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Entry
KCTCHS21_23200 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohn
Cohnella abietis
Pathway
cohn03420
Nucleotide excision repair
cohn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTCHS21_23200
03430 Mismatch repair
KCTCHS21_23200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_23200
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_23200
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTCHS21_23200
MMR (mismatch excision repair)
Other MMR factors
KCTCHS21_23200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
Swi5
Motif
Other DBs
NCBI-ProteinID:
BBI32921
UniProt:
A0A3T1D4D3
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All DBs
Position
2724836..2726536
Genome browser
AA seq
566 aa
AA seq
DB search
MPMNSINSDTLISTEQHFRVSAGPGAGKTHWLIEHIKNVLHHSTRLGKTRKVVCITYTNI
AVETILDRLGTTAAQVEVATIHSFLYKHIVKPYASFLVADYNLNLAAMDGHDETILSNYS
FLKEWKDRTKQQRITDDKLIVDAFKAAKWKFDSSDNLIIKTDYPRKVGVYSIKNDSYFEY
KRMTWEKGIIHHDDVLFFSYQLVKMHPFILKVLQSKFPYFFVDEFQDTNPIQVAILELIG
VRETIVGIIGDRAQSIYGFQGAEPSQFHSFTLDEIVDYVMEDNRRSTNQIIDILNTVRLD
IKQNKYKNEEGDKPTIIVGEMLASLKKAKEMSNNEPVNSLSRINITSNVMKKEISGTIFN
DKLIEELTAKDTPTSSNKYRSKVVAACLKATEFAREGKYKYAIKELEQISKDEHDKHKRR
KVALSHICLLLSKYNEFKDQSLFDFYSVVKSNIKADISKLANGAAKTFYEGHSYQELALC
VKIDEDISRHKTIHKSKGDEFNNVLVVLRDESDIEFLLSPNLNDKEEQRINYVAISRAIK
RLYINIPTLSEDNMTKLKLMFGIVTV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgaattctataaattcagacacgctgatttctactgaacaacattttcgtgta
tcagctggaccaggcgctggtaaaacacactggttaatagaacatatcaaaaatgtgctc
catcattcaactagattaggaaagacaaggaaagttgtttgtattacatatacaaatatt
gcagttgaaacaattttagaccgattaggaacaacagcagcccaagttgaagtagcaaca
attcatagctttttatataagcatattgtaaaaccctatgcctcatttcttgtcgctgat
tataacttgaatctagctgctatggatggtcatgacgaaactattttatcaaattattct
tttttgaaagaatggaaagataggactaagcaacaacggattacggatgacaaattaata
gttgatgcctttaaagctgcaaagtggaaatttgattcatcagataacttaattataaag
actgactatccacgtaaagttggagtatattccattaagaatgactcgtactttgaatac
aagagaatgacttgggaaaaaggaataattcatcatgatgatgtgctcttttttagttat
caactagtaaagatgcatccgtttatattaaaagtattgcaatccaagtttccatacttt
tttgtggatgaatttcaagacacaaatccaatacaagtcgcaatattggaattaatagga
gtgagagaaacaatagtcgggattattggagatagagcacaatctatatatggctttcaa
ggtgctgaaccttcacagtttcattcatttacattggatgaaatagttgactatgtaatg
gaagataatagacgaagcacaaatcagattattgacatattaaatactgtacgtttagac
ataaagcagaataaatacaagaatgaggagggcgataaacctacaattatcgttggtgaa
atgcttgcttcgcttaaaaaagctaaagagatgagtaataacgaacctgtaaattcgtta
tcgaggataaatattacttcaaatgttatgaagaaagaaattagtggtaccatatttaac
gataaattaattgaagaattaactgctaaggatacacctactagtagtaataagtataga
agtaaagtagttgcagcttgtctaaaggccactgaatttgctcgtgaaggcaaatataag
tatgcaataaaagaattagagcaaataagtaaagatgaacacgacaaacataaacggaga
aaagtggctttaagtcacatttgtttactcttgtcaaaatacaatgaattcaaagaccaa
tcattgtttgatttttattcagtcgtaaaaagtaatattaaagctgatatatctaaatta
gcaaatggcgcagctaaaactttttatgaaggtcatagttatcaagaactagcattgtgt
gtaaagattgatgaggatattagtagacacaaaactattcataaatcaaaaggtgatgaa
tttaataatgtattagttgttttaagagacgaaagtgacattgaatttttattatccccc
aatttgaatgataaagaagagcaaagaataaactatgtagcgataagccgggccattaaa
cgattatatataaatatacctacattgtctgaagataacatgacaaaattgaagttaatg
ttcggaattgtaacggtttaa
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