Cohnella abietis: KCTCHS21_23570
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Entry
KCTCHS21_23570 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_23570
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KCTCHS21_23570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
HTH_18
HTH_AraC
HTH_71
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BBI32958
UniProt:
A0A3T1D4J5
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All DBs
Position
complement(2770253..2771914)
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AA seq
553 aa
AA seq
DB search
MINRAPTSAPLRSLIFHLSDIELQVQSVGWHSDKQTTTYHTLLIVTAGTGCLHMDSHIVP
FTADKCYLLSPNRSIQIENGHDKALRFFQISFTAISNLNQQPEIYVENIFADRFEMIAYP
FSRLIRLTEEIYAERSYESDIESFKQQLRFQELLGFIIEHNLPSDSLFNSTQSVESTIHY
LQNNYTHNITVKQLAQLANMPHWQFTPIFQELTGKRPLDFLTELRINRSKELLIDSNAPL
REIAHQVGFTDEYYFNRRFRHTTGVTPKQYARYKRNKTKVRDWTGHDVEIPAQPQRIIFF
GETFGDLLALGIEAIGGGVFWIDHSAFKDRVKNVEDVGDPINPNILKALKPDLIIFANAD
ERQYSKISKIAPTVTFNTFAPLEQRMNALGHLLGRKHEVEKWLDVYNTKAALAWKKLQTH
INHGETASVFIFDHGERLFVMGASGLSSALYHPFGFQPVDRIQEIIDSGDGFMEISAELL
PEYAGDRIFMLLPQKKDSKEAMEELMRSALWRSLPAVQKGRVYVVEAAKWNSGDAFTREL
LLEALPRLMGKIS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgagcgccgacatctgctccactccgctccctgattttccacctgtcggat
attgagctacaagtccaatctgtagggtggcattccgataaacaaacaacgacgtatcat
acactactgatcgttactgctggaacaggctgcttacatatggatagccatattgtccct
ttcactgctgacaagtgctatttgctgtcaccgaatcggtccattcaaatcgaaaatgga
catgacaaagcacttcgctttttccaaattagctttactgccataagcaatctaaatcag
cagcctgagatatatgtagaaaatatttttgccgaccgatttgaaatgatcgcatacccc
ttctctcgattaattcgtctcacagaggaaatatatgcggaaagaagctacgagagcgat
attgagtcgtttaagcagcagctgcgctttcaggaattgcttggctttataatcgaacat
aatctaccttctgacagcttgtttaactctacccaatcggtcgaaagcactattcattat
ttgcagaacaactacacacacaatattacagtcaaacagcttgcccaattagctaacatg
ccgcactggcagttcactcccatatttcaggagttaactggcaagcgaccgctagatttc
ttaacagagctacgtattaatcgctctaaggaattgctcattgattccaatgcaccttta
cgggaaattgcccaccaggtcggctttactgatgagtactactttaaccggagatttcgt
catacgactggtgtgactcctaagcaatatgcccgttataagcgtaataaaacaaaagtg
agagattggacaggacacgatgttgaaataccagctcagccccagcgtattatctttttc
ggggaaaccttcggtgatctactagctcttggcattgaagctatcggtgggggagtattc
tggattgatcattccgcgtttaaagatagggtaaagaatgtagaggatgttggagatcct
attaatcctaatatcttaaaggcgctgaagccggatttaattattttcgccaacgctgat
gaaaggcaatacagcaaaatctctaaaattgctcctactgtaacatttaataccttcgca
ccgctagagcagcgtatgaatgcactcggccatttacttggaagaaagcatgaggttgag
aagtggctggatgtgtataacactaaagctgcgctcgcgtggaaaaagctacaaacccat
attaatcatggtgaaacagcctctgtgtttattttcgatcatggggagcggctattcgtt
atgggggcgtctggactttcttcggcactctaccaccctttcggctttcagcctgttgat
agaattcaggaaattatcgattcaggggatgggtttatggaaatctctgcagagctttta
cctgaatatgcgggagatagaattttcatgctgcttcctcagaaaaaggattctaaagaa
gccatggaggagctcatgagaagcgccctctggcgaagcctccctgctgttcagaagggt
agagtttatgtcgtggaagcagcgaaatggaattccggcgatgcttttacaagagagctg
ctgcttgaagcccttcctcgtctgatgggcaagatttcttag
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