Cohnella abietis: KCTCHS21_25400
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Entry
KCTCHS21_25400 CDS
T05979
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cohn
Cohnella abietis
Pathway
cohn00300
Lysine biosynthesis
cohn00470
D-Amino acid metabolism
cohn01100
Metabolic pathways
cohn01110
Biosynthesis of secondary metabolites
cohn01120
Microbial metabolism in diverse environments
cohn01230
Biosynthesis of amino acids
Module
cohn_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
cohn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KCTCHS21_25400 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KCTCHS21_25400 (lysA)
Enzymes [BR:
cohn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KCTCHS21_25400 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBI33141
UniProt:
A0A3T1D4Y8
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Position
2953361..2954692
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AA seq
443 aa
AA seq
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MFLHGTSKINSKGHLEIGGCDVTDLAQEFGTPLYIVDEALVRQRAREFMEAFRTTGLRHQ
VAYASKAFCVMAMCRVAEEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEIVMA
LDAGIGCFVVDNFDELHLLNALAADKGKRVNVLLRITPGVEAHTHDYISTGQQDSKFGFD
LGNGTAFTAIETAIGLSSLKVLGVHSHIGSQIFEVEGFRMAVEKVAAFAVEIRDRLNHTF
TVLNLGGGFGIRYVEGDQPLPVGVYVQAIADAVRTTCENANFALPEVWIEPGRSIIGDAG
TTLYTVGTSKDIPGVRKYIAVDGGMTDNPRPALYESKYEAVLANRANDTLNELVSVAGKC
CESGDMLIWDLKLPAVQSGDLLAVFCTGAYNYAMASNYNRIRRPAVVFVKDGKADLVVAR
ETYHNIVGNDIIPQRLQKEAVSK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacatggtacaagcaaaattaatagtaagggtcatcttgagatcggaggctgt
gatgttacagacttggcacaagagtttggaacgcctctatacattgtggatgaagcactt
gtgcgccaacgtgctagagaatttatggaagccttccgtacaaccggacttcgtcaccag
gtcgcttatgcgtccaaagctttttgcgttatggctatgtgtcgtgtagcagaagaagag
ggcatgagtctcgatgttgtatctgacggggaattatataccgcgcttcaagcaggcttc
ccagcagagcgcattcatttccatggcaataacaaaacacctgaagaaattgtaatggca
cttgatgctggaattggctgctttgtcgtcgacaatttcgatgagctgcatcttttgaat
gcattagcagcagataaaggcaagcgcgttaacgtattgcttcggattacgccgggagtc
gaggcacatacccatgattacatctctacaggtcaacaggactccaagttcggctttgat
cttggcaatggtacggcatttacagctattgaaactgctattggcttatcgagcttgaag
gttctgggcgtgcattctcatatcggctcgcaaatctttgaagttgaaggcttccgtatg
gctgttgagaaggtagcggcattcgccgtagagattagagacaggcttaatcacacattc
acagttcttaacttgggtggaggcttcggaatccgttatgtggaaggcgatcagccgctc
cctgttggtgtttatgtgcaagctattgccgatgctgttcggacgacttgcgaaaatgcg
aactttgcgttgcctgaagtatggatcgagccgggccgcagtattatcggcgatgcaggt
acgactttgtatacagtagggacaagtaaggacatcccaggggttcgtaaatatattgca
gttgatggtggaatgactgacaacccgcgtcctgctttatacgagtctaaatatgaggcg
gttctggcgaaccgtgcgaacgatacattaaacgagctagtgtctgttgctggaaaatgt
tgtgagagcggagatatgcttatatgggatttgaagctgcctgctgttcagtctggtgat
ttgctggctgtattctgcacaggtgcttacaattatgcaatggcaagcaactataaccgg
attcgtcgcccagctgttgtgttcgttaaggacggcaaagcagatctcgttgtagctcgt
gaaacttatcataacattgttggtaatgatatcattccacagcgcttgcagaaggaagct
gtttcgaagtaa
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