Cohnella abietis: KCTCHS21_25900
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Entry
KCTCHS21_25900 CDS
T05979
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cohn03032
]
KCTCHS21_25900 (hupA)
03036 Chromosome and associated proteins [BR:
cohn03036
]
KCTCHS21_25900 (hupA)
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_25900 (hupA)
DNA replication proteins [BR:
cohn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KCTCHS21_25900 (hupA)
Chromosome and associated proteins [BR:
cohn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KCTCHS21_25900 (hupA)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KCTCHS21_25900 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Rpf1_C
CcFV1_CP
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
BBI33191
UniProt:
A0A3T1D532
LinkDB
All DBs
Position
2998979..2999251
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELITKVAELADLSKKDATQAVDAVFDVISEALQGGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPAGKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactgaattgattaccaaagttgccgagttggctgacttgtctaagaaagac
gcgacgcaagcggttgacgctgtgttcgatgttatttccgaagctttgcaaggtggagat
aaagtgcaactagttgggtttggtaacttcgaggtgcgcgagcgttccgctcgtaaagga
cgtaatccgcaaactggtgaagagatcgagattccagctggtaagatcccagcattcaag
ccgggtaaagcgcttaaggacggtattaaataa
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