Cohnella abietis: KCTCHS21_26340
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Entry
KCTCHS21_26340 CDS
T05979
Symbol
birA
Name
(GenBank) bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
cohn
Cohnella abietis
Pathway
cohn00780
Biotin metabolism
cohn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
KCTCHS21_26340 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_26340 (birA)
Enzymes [BR:
cohn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
KCTCHS21_26340 (birA)
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
Other families
KCTCHS21_26340 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_LplA_LipB_2
HTH_24
Fe_dep_repress
BPL_C
Rrf2
TrmB
MarR_2
GntR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BBI33235
UniProt:
A0A3T1D5J8
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All DBs
Position
3037588..3038556
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AA seq
322 aa
AA seq
DB search
MSKDNLLNLLEAEAGKYVSGEEISQKLQVSRTAVWKKIRKLTSEGYIIEAVPRLGYRLSG
KPSHLSVHELLPKLNTKSFGRALHLLDVVPSTQDEVRRLADQGAAEGTLVIAEQQTKGRG
RMGRSWASPKGKGIWMSLLLRPPVPLPLTPQLTLLAAVALSRGISRLVPITIGIKWPNDL
LVNGKKISGILLESAAEDERLRYVIVGMGISVNLDPEDYPEELLEKAISLKMASGAVIDR
SELIAVILEEFERLYALYLEQGFAPIRSLWEAHSVTLNNHTVLNTPQGQVQGIPRELDDM
GGLRIELEDGSFKTIYSAVIDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacaacttattaaatctattggaagccgaagcgggtaaatatgtctcgggt
gaggagataagccagaagctacaggtaagccggacagctgtctggaaaaaaattcggaag
ctgacatcggaaggttacattatcgaagccgtgccgcgtttgggctatcgattatcgggt
aagccttcccacctttctgttcatgagcttcttcctaagctaaacacgaagagcttcgga
cgggctctgcatctccttgacgttgtcccctccactcaggatgaagtacgtcggttggca
gatcagggtgctgctgaagggacattggttatcgctgagcagcagaccaagggtcgaggc
agaatgggacggtcatgggcctctccaaaaggaaaaggaatatggatgagtctactcctt
cgcccgcctgtgcctcttccgttaactccgcagctaactcttcttgctgctgttgcgcta
agccgtggtatatctcgccttgtgccaattacaattggaatcaagtggccgaacgatttg
cttgtgaatggtaagaaaattagcggcattttattggaatccgctgcggaagatgaaaga
ttgcgctatgttattgttgggatgggcatatcggttaaccttgatcctgaggattacccg
gaagagctgctagagaaagcaatctcgttgaaaatggcatcaggtgctgtaatagatcgt
agtgagctcatcgctgttatactcgaagaattcgaacgattatatgcgctctatttggaa
caaggctttgctcctatccgatcattatgggaagcccattccgttacactgaataatcac
accgtattaaatactccccaaggtcaggttcaaggaatcccgcgagagcttgatgatatg
ggcggtttgcgcatagagcttgaggatggaagcttcaaaacgatctattcggctgtgatc
gattcatag
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