Cohnella abietis: KCTCHS21_27980
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Entry
KCTCHS21_27980 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_27980
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KCTCHS21_27980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
BBI33399
UniProt:
A0A3T1D5W2
LinkDB
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Position
complement(3230906..3232525)
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AA seq
539 aa
AA seq
DB search
MFSLVLTDVLTQTYSGEDSLELSSSDNYRLLIVIQGRLSMQFQQHNSIAEAGTCTLLLPN
HLCSLKVHISSRLYLLTFISIEQQKSLGATDQLIKSITGKTYLPLSNLIKCTESIAHKPD
EQDVLLQLHKQQHFLYLLTLLVEQRTLEEQQVCFDPNHAVEETLHFLHNSYSMNVSVQQL
ADRAQLPRWQYLRSFKQLTGCNPSSYITHLRMEEAKRLLSSTNERIWEVAQKVGYDDEQY
FNRRFKQLMGMSPGQYTRIQNHQQQVKDWRGITQLVPSSAKRIVYDDASTLGDLLALGIA
PIGASLRFYNYEPVIHQLERTQDIGFPVNLEKVRELNPDLVLLSRYACEQSPQVSEIAPT
VGLNEYASMHNRLRKLGEILGVYDTTKKWIEEYDIRCELIWRELQTRKSEKETAVVLFYD
SNRELYLMHRNRGLLRIIYHPMGFKRDERIQHIRPNHGDYYIHIDPNIIDQYALGDRLFI
LVRPSNNMRSAKKALQSLPGWSTLPAVKNGSVHFLSSHWNSDDAWTSSYTLNHFTRLWS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcttgtgttaaccgatgtgcttacccaaacctacagcggtgaggattcgctt
gagctgagtagttcagacaattatcgtttgcttattgtcattcaaggaaggctgagcatg
caattccagcagcataatagtatagctgaggctggaacttgtacacttcttctaccgaat
cacctctgtagcttgaaggtgcatatatccagcaggctttatttgttaacctttatttcg
atagagcagcagaaaagtttgggggcaactgatcagctcataaagtcaattacaggaaaa
acttatttaccgctgtcaaatcttattaaatgcacagaaagcattgctcataagccagat
gagcaggatgtgttgcttcagttgcataagcagcagcattttttatacctgcttactctt
ttagtagaacaacgaacacttgaggaacagcaagtatgctttgacccaaaccatgcagta
gaagaaaccctgcattttttgcacaatagctattccatgaatgtcagtgtacagcagtta
gctgatagggcacagcttccacgatggcaatatctacgtagcttcaaacaattgactggc
tgcaacccaagcagctatattactcatttgcgaatggaagaagcaaagagacttttaagc
agtacgaatgaacggatatgggaggttgcccaaaaagtcggttatgatgacgagcaatat
tttaaccgtcgattcaagcaattaatgggcatgtctcctgggcaatatacacgcatacaa
aatcatcagcagcaggttaaggactggcgtggaataacccagctcgtcccttcgtcagcc
aaacgtatcgtgtatgacgatgcaagcacgttaggcgacttgcttgcattggggattgct
cctatcggagcaagcttgcggttctacaactatgaacctgtcatccatcagttggagcga
acacaggatattggttttccagtcaatttggagaaagtacgtgaacttaacccggatctc
gtgctactgagtcgttatgcctgtgagcaatcccctcaggtcagtgaaattgcaccaacc
gttggcttgaatgagtatgcttcgatgcataatcggctaagaaagctcggtgaaattctt
ggcgtatacgatacaaccaagaaatggatagaagaatatgacataagatgcgagctgata
tggagagagcttcagactagaaagtccgaaaaggaaacagcggttgtcctcttctatgac
tctaatagagagctgtatctaatgcatcgcaatagaggattactacgaattatttatcat
ccgatgggctttaaaagggatgagcgcatacagcacattcggccaaatcacggagactat
tatatccacattgatccgaatattatcgatcaatacgctttaggggatcgattatttatt
ttagtccgaccatctaataacatgcggtctgccaaaaaggctttgcaaagcttgcctggt
tggagcactctgcctgctgtaaaaaacggaagcgtacattttcttagttcccattggaat
tcagacgacgcttggacaagcagttatacgctaaatcatttcactcggctttggtcataa
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