Cohnella abietis: KCTCHS21_29880
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Entry
KCTCHS21_29880 CDS
T05979
Symbol
btr_3
Name
(GenBank) HTH-type transcriptional activator Btr
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cohn03000
]
KCTCHS21_29880 (btr_3)
Transcription factors [BR:
cohn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KCTCHS21_29880 (btr_3)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
Peripla_BP_2
HTH_AraC
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
BBI33589
UniProt:
A0A3T1D6A1
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Position
complement(3419587..3421179)
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AA seq
530 aa
AA seq
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MTLHIQNEQLYLFSTIHYYQHRESADLNKMGLNEAVSHFLFVASGKGTIEMDETIYSVES
LQLYFLPEGTALQGMLFGHHIQYYIIGFQMISLSKQGNQWIGEQSAANSGLLLAGYIELQ
DNTSIHPEIKNLYETNLLPNNRTHSNLILQKLLLDIHNQRAIPTEIHSDSTPKWNGIEES
IHYMQANLSKKMDRDSLAAIAKLTPSSYCRSFKKAKGVAPMDYLTHIRMEQAKLLLSTGI
TCKQVAYRLGYVSEYYFSRVFKKMTGLPPTIYMKRDHSRIAVASRFGIHLNLESLGIEPV
VVIDCYHHPGIEQEDYNRRLMSQLEELKAAQPDLIIGDYSHASFSEPFKRIASTAFLNYD
LDWVVPHRKIAELVGREKEAQKVIEDLDERIAQVKQRIKAMDAPPRVVVMQIMGDHFYLQ
GVNNHPLNKLLYTELGLLPGKHVPKHKMRMELYPTHLPDVEADQLWIRLYSDTADVMQTL
QRMQEQPHWSNIAAVRNDQAHFINNWLIMSWTPQGRSQIVDEVMAYLKIV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
gtgacacttcatatacagaatgagcagctctacctcttctcgactatccactactaccag
catcgtgaaagtgcagatttgaacaaaatgggattgaatgaagcagtcagccatttctta
ttcgtcgcttcaggcaaaggaactattgagatggatgaaacgatatattccgtcgagtct
cttcagctttattttttaccagaaggcaccgcactacagggaatgctgttcggacaccac
attcagtactatataatcggctttcaaatgatctcgttatctaaacaaggtaaccaatgg
ataggggagcaatccgccgccaactctgggctacttctagctggatatatcgaattgcaa
gacaatacgtctattcaccctgaaataaaaaatctctatgaaacgaatctcttacccaat
aatcgaactcattctaatctcatacttcagaagctactcctagatatccataatcagagg
gcaatacctacggaaattcactcagacagcacacccaaatggaatggcattgaggaaagt
attcattacatgcaagctaatctcagcaaaaaaatggatcgagactccttagccgcaatc
gctaagttaacgccaagctcttattgccgcagctttaagaaagccaaaggtgttgcgcca
atggactacttaacccacattcgcatggaacaggcaaagctacttctatccaccggcata
acttgtaagcaagtagcctatcgattgggatatgtgagtgagtattattttagccgtgtg
ttcaaaaaaatgaccggattgccgccaactatctacatgaaaagggatcattcacgaatt
gcagtcgcttcacgtttcggtattcatttgaatttggagtcactgggtatcgagcccgtt
gtcgttatcgactgttaccatcatcccggaattgagcaggaagactacaaccgccggctt
atgagccagcttgaagagctaaaagcagcccagcccgaccttattatcggagattattct
catgccagcttttcagaaccatttaaacgaattgcctctacggctttcttaaactatgat
ctagactgggtcgtgccccatcgaaaaatagctgaattggtagggagagaaaaggaagcg
caaaaggttattgaggatttggacgagaggatagcacaggtaaaacagcggataaaagct
atggatgctccgccacgggtagtggtcatgcagattatgggtgatcatttttacctgcaa
ggcgtaaataatcatccgttgaacaagctgctatacacggagctgggattgctcccaggt
aagcatgtaccaaagcataagatgagaatggagctttaccccactcaccttcccgatgta
gaagcagatcaattgtggatccgactctactctgatactgcggatgtcatgcaaaccttg
caacgaatgcaagaacaaccccattggagcaacatcgccgccgtccgtaacgaccaagcc
catttcattaacaattggctcattatgagctggaccccccaaggcaggagccagattgta
gacgaggtaatggcatatttgaaaatagtgtga
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