KEGG   Cohnella abietis: KCTCHS21_36110
Entry
KCTCHS21_36110    CDS       T05979                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cohn  Cohnella abietis
Brite
KEGG Orthology (KO) [BR:cohn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cohn03400]
    KCTCHS21_36110
Enzymes [BR:cohn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KCTCHS21_36110
    5.6.2.6  RNA 3'-5' helicase
     KCTCHS21_36110
DNA repair and recombination proteins [BR:cohn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KCTCHS21_36110
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_3rd_Lhr Helicase_C WHD_4th_Lhr ResIII WHD_2nd_Lhr
Other DBs
NCBI-ProteinID: BBI34212
UniProt: A0A3T1D802
LinkDB
Position
complement(4064760..4069220)
AA seq 1486 aa
MKGSNTLPFHPVISSWFTGSFGDPTDVQLRAWESIMAGQHTLIAAPTGSGKTLAALLPCL
DNLVRSKSPGGVRILYLTPLKALNNDIHHHALQFVEQLDALAMQQGAQWPGIRCEVRTGD
TSQSKRASILRNPPDLLITTPESLFLLLTSVKGRAILENVEQVIVDEIHDLAADKRGSHL
SLTLERLAYRCARPLQRIGVSATQKPLERVARFLGGWELAEEPVAMVESIAGAVDGRAMR
PRPVKIVESTMSKSISVLITMPDQSRPAATREAVWLPLLDRIVQAIEGCRSVLIFVNSRR
LCERLCLRLNDHVGYEMARSHHGSISRERRLEVESMLKEGSLRCIVATSSLELGIDVGHI
DLVIQIDSPQEAARGIQRIGRAGHAVGEASQGVIIARQKAVLPELAVLGRQIALRQIEDI
RIPHGPMDVLSQQVVAMVAMDDWDTHALHRLILHSDSYHDYSLARYEEMLQVLGGFYPFV
RPLIEWERDTNQLRKRSNTAMASITGAGTIPQSGGYPVHHLESRAHLGELDEEFIQESRV
GDVFQLGTSSWMIRDIRNDRVYVSEAGNRFSEIPFWRNEAGSRSYELGRKIGEFLRTLSD
RMVLTNDEGVEKDSEAEYNDEIYEWLQTSYGMDRVSSEEMLALVRSQHRACALPTDKQIV
IEYYRDVMNQTHVIIHNHCGRTVNRAWLLAIERKFEQLLPYKLYGNAKDNGIELVIPEWD
ASWLQMINQVTPANLEQLLTEAITGSPLLGIAFRRIAETSLLLSRSFTRTPMWQKRLRSE
ELLRGALPYAEHFPYLREAMSECLHDYLGYEELKYQLEKLVTGEMSIVVRETPFPSPFAA
QFLADYVNMRIYEGDGLDETIRLQLLNVSKELAGQLFDISSTGNAINDEVIEEQNRAMNE
PELSPRNTDELATLLKRRGDLTANEIVKLAGESALSWLQLLHEQGRAISLNLTGDGEFRW
ISSDEREVYADFPETATAITFVIGRYVDYLISFTEAELCERYPSLTLNSAKKAVEQMLEN
GMIERAPHAATEDERLWTSSKVASRLVRLSIRHARNRADPVEPARWCSQIAFMQHALQGT
QQQGSEGLLTVIERLQGLFLPLSHWESIIFPSRVSPYRKEHLDTLCASGEVLWMGRKEEG
DKEGKVAFFLTESKPLYAPFINQTSAELAPCKHPRLLELLEVSGATFLTRLSREMDKPPT
ELLADLLELVWEGRVSNDQFAPLRLQINKKQANWAKTGSGLGRWYATSSLQEDTAASDSN
KTSDSAEKDSPVLIWTHHLLKVYGLINKELIARASPFTWDTCYPVLKRLEEWGVLTRGAF
IRGIPSLQFTTRELNDSVRQPLPDISDNRATILCSADPANPYGLMIDWPQGAQGAQGASG
TPAISFSRKPGNFLLLKDNQWVLWIENNGRKVYQVSTADENEKDVPIDHLVKLLQSAFQT
IIQRRKIVKLKVEMWNGEPIIDTEMGKALMKQEAERDLRSLVFWST
NT seq 4461 nt   +upstreamnt  +downstreamnt
gtgaagggctcgaatacattgccattccatcccgtcatttcttcgtggtttactgggtcg
ttcggggatccgaccgatgttcagctccgagcctgggagtccattatggcaggtcaacat
actctcattgcggctcctaccggatcaggaaagacattggctgccctacttccctgcttg
gataatctagtgcgttcgaaatcgccaggaggcgttcggattctctatctgacaccactt
aaagcattgaataatgatattcatcatcacgcgctacaatttgtcgagcaattggacgct
ctagctatgcagcaaggtgctcaatggccgggaattcgctgtgaggttcggacaggtgat
actagtcagagtaagcgtgcttctatcttgcgtaatccacctgatttacttattacgacg
cctgaatctttgtttttgctgctcacatcggttaaaggacgggcaattctagaaaatgtg
gagcaggttattgttgacgagatacacgatttagcagcagacaagcggggctcccatctt
tctttaacgttggagaggttagcttatcgttgtgcgagaccgcttcaacgtattggcgtt
tcggcgacgcaaaagccgcttgagcgagttgcccgttttcttggaggctgggagctggcg
gaagagcctgtcgctatggttgagagcattgctggagcggtggatggcagagctatgcgt
ccacgtccagtaaagatcgtggagagtacaatgagcaagagtattagtgtgctcattacg
atgcctgatcagagcaggcctgcggccactagagaggcagtgtggctgccgcttctagac
agaatcgtgcaagcgattgaaggctgccggtcggtgcttatttttgttaatagtaggcgg
ctatgcgagcggctttgcttgcgcttgaacgatcacgttggttatgaaatggccaggtcc
caccatggaagcatctctcgtgagcgtcgcctagaggtggagagcatgcttaaggaggga
agcctgcgctgcatcgtcgctacctcatcgttagagcttggcatagatgtaggtcatatt
gatctggtcattcagatcgattcgcctcaggaggctgcacgcgggatccaacgtatcggt
cgtgcaggacatgcggtgggggaagctagtcagggtgtaatcatagctcggcagaaagct
gtgctgcccgaattagcggtgctaggcagacagattgctcttcgccaaattgaggatatt
cgtattcctcatggtccgatggacgttctatcccaacaggtagtagcgatggtcgcaatg
gatgactgggacacacacgcattgcatcgccttattttacatagtgatagctaccatgat
tattcgctggcacgttacgaggagatgctacaggttttagggggattttatcctttcgta
agacctcttattgagtgggaacgcgatacgaaccagctaagaaaacgaagcaatacagca
atggcatccataacgggcgcgggtacgatacctcagagtggtggatatcctgttcatcat
ctagagagcagagcacatctcggtgagcttgacgaagagtttatacaggaaagccgcgtc
ggggatgtttttcaattagggacaagctcttggatgattcgggatatccgcaatgatcgg
gtttatgtgtctgaagcgggtaatcggtttagcgagattccattttggcgaaatgaggca
ggaagccgttcgtacgaattggggaggaagattggtgagttcttaagaacactttccgac
cggatggtgcttacgaacgatgaaggagtggaaaaagatagcgaagcggagtataacgat
gagatctatgaatggctacagacaagctatgggatggatagagtctcctcagaagaaatg
ctagcgcttgttcgttcccaacacagagcatgcgcactccctacggataagcaaattgtc
attgagtattatcgcgatgtaatgaatcaaacgcacgttatcattcataatcattgtggc
agaacggttaatcgtgcgtggctattagctattgaaaggaaattcgagcagctactgcct
tataagctgtatgggaatgcaaaggataatggcatcgagctcgtcattcctgagtgggat
gcgtcatggctacagatgatcaatcaggtgacacctgctaaccttgagcaattgcttact
gaagcgataacaggttctcctttgctcggtatcgcgttccgtaggattgcagagacatcg
ctactgctttcccgaagctttacccgcacaccgatgtggcaaaagcggctgcgcagcgaa
gagctactcagaggggcgttgccctatgcagagcactttccctatttaagggaagcgatg
tcggaatgtcttcatgactacttaggctatgaagaattgaaataccagcttgagaagctg
gtaacgggagaaatgtccatagtcgtacgcgagacaccatttccttctccttttgctgca
caatttttagccgattatgtcaatatgagaatttacgaaggagacggattggacgagacc
attcgtctacaattgctaaacgtgagtaaggagctggcgggtcagttatttgacatcagc
tcaacaggaaatgccattaacgatgaggtaatagaggaacaaaatcgtgcaatgaatgag
cctgagctttctccgcggaataccgatgaattggcaacacttcttaagcgcagaggggac
ttaactgcgaatgagatcgttaagctagcaggggaatcggcccttagctggcttcagcta
ctacatgaacagggacgggctatctcgttgaatcttactggagacggtgaatttcgttgg
atttcgtctgacgagcgagaagtatatgccgattttccggaaacagcgaccgctattaca
tttgtcatcggtagatatgttgattacttgatttcattcacagaagccgagctttgtgaa
cgctatccttcgttaacgctcaattccgcgaagaaagcagtcgagcaaatgctcgaaaac
ggaatgatcgagcgggctccgcacgctgcaacagaggatgaacggttatggacgagctcc
aaggttgcatcacgtctcgttcgattgtctattcgtcatgcccgcaatcgggcagatcca
gtcgagccagcaagatggtgcagccagatcgcctttatgcagcatgctctccaagggact
cagcaacaaggcagtgagggccttttgacggttattgagcggctgcagggcttatttcta
cccttgtctcactgggagtctatcatattcccatcgagggtatcaccgtatcgtaaggag
cacctggatacgttatgcgcgtccggtgaggtcctctggatgggacgtaaggaggaaggg
gacaaggaggggaaggttgctttcttcctcacggagtctaagcctttgtatgctcctttc
attaatcagacaagcgcagaactagctccatgcaagcatccacgattgttagagcttcta
gaagtgagtggtgccaccttcttaactcgactgagtagagagatggacaaaccacctacg
gaattgctcgcggatctgctggagctcgtttgggaaggcagagtttccaatgaccagttt
gcacctcttcgacttcagatcaacaagaagcaagccaattgggctaaaacaggctctgga
cttggacgatggtatgcaacgagttctcttcaagaggatacggctgcttcagatagcaat
aagacatcggactcagcagaaaaagattctccagtgctaatatggacacatcatttgctt
aaagtgtacggattaattaacaaagagctgatcgctagagcctcgccctttacttgggac
acttgttaccctgttctaaaaaggctagaggaatggggcgtcctgacaaggggggctttc
attcgaggaataccttctctccagtttacaacacgcgagctaaacgattccgtgagacag
ccgctacccgatatatcagacaaccgcgcaacaatcttatgctcagcagatccagctaac
ccttacggtctaatgatagactggcctcagggagcacagggagcacagggagcatccgga
acccccgctatatcgttctctcgtaagccgggaaacttcttgctgttgaaggacaatcaa
tgggtattatggattgaaaacaatgggagaaaagtatatcaggtttctacagctgacgag
aatgagaaggatgttccaattgatcatctggtgaagcttttacaatcggcttttcagacg
atcattcaaaggagaaagatcgttaagctcaaggtggaaatgtggaacggcgaaccgatt
attgacacggaaatgggcaaagctcttatgaagcaggaagcagaacgcgatttacgctca
cttgtattctggtccacctaa

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