Cohnella abietis: KCTCHS21_40180
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Entry
KCTCHS21_40180 CDS
T05979
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
cohn
Cohnella abietis
Pathway
cohn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KCTCHS21_40180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohn02000
]
KCTCHS21_40180
Transporters [BR:
cohn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KCTCHS21_40180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
TOBE_2
nSTAND1
ABC_ATPase
AAA_16
AAA_22
RsgA_GTPase
AAA_23
AAA_29
AAA_25
AAA
Rad17
AAA_5
nSTAND_NTPase5
NACHT
nSTAND3
ORC-CDC6-like
NB-ARC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BBI34619
UniProt:
A0A3T1D967
LinkDB
All DBs
Position
complement(4471867..4472910)
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AA seq
347 aa
AA seq
DB search
MNAYLELQGIRKQFGNTSVLNNVDLKIREGELVTLLGPSGCGKSTLLRCIAGLTEIDGGR
MLLEQKDIVNLPPRSREIGMVFQSYALFPNLTVSENIQYGMKMRGASKEARRNRSEELLV
LIDLEDKRDAYPQHLSGGQQQRVALARSLAVQPKLLLLDEPLSALDAKIRKNLRTEIRDI
QKKFNMTTIFVTHDQEEALTLSDRVCLMNKGSIVQEGTPEAVYTTPRTEFVARFMGSYNV
LTRPEALRLFEQLDSASESFAIRPESVLLLSEETRSDAVHAGKRIVEGTVYSVTILGNII
RYSIDVAGVMLTIDTLNDGRSLRIKERSLVSLALDGSQLLHLDREGA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtatttggagctgcaaggcattcgtaagcaattcgggaatacgagcgtgctg
aacaatgtggatttgaaaatccgagaaggagagctcgtgacgttactcggaccttctggc
tgtggaaaaagcacgcttcttcgctgtatagcaggtctcacggaaatagatgggggacgg
atgctgctagaacagaaggatatcgtgaatcttcccccacgaagtcgagagatcgggatg
gtattccaatcctatgcgttgtttcccaacttaacggtcagtgagaatattcaatatggg
atgaaaatgagaggtgcctccaaggaagctagacgcaatcggtccgaggaattgcttgta
cttattgacttagaggacaaacgcgatgcatatccccagcacctatccggcggacagcag
cagcgtgtagcgcttgctcgttcgcttgctgttcagcccaagcttctattacttgatgaa
ccgcttagtgcattggatgctaaaattcgtaaaaacctgcgaacggaaattcgcgacatc
cagaagaaattcaatatgacgacaatattcgtaacccacgatcaggaggaggcgttaacc
ttatccgatcgggtatgtcttatgaataagggaagtattgttcaggaggggaccccggaa
gcggtatatacgactccgagaacggaatttgttgctcgttttatgggaagctacaacgtg
ctaacaaggcctgaagcgctcaggctgtttgaacagctggacagtgcgtcggaaagcttc
gctattcggcccgaatcggtccttctcctgagtgaggaaacccgttccgatgccgtacat
gcaggaaaacgaatcgtagaaggtacggtttattcggtcacaattctaggcaatatcatt
cggtactcaattgatgttgcaggtgtgatgctgacgattgatacccttaatgatggacgt
tcgctgcgaattaaagagcgaagccttgttagcttagccttagatgggtcacagctcttg
cacctcgacagggaaggggcgtaa
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