Cohnella abietis: KCTCHS21_40290
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Entry
KCTCHS21_40290 CDS
T05979
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cohn
Cohnella abietis
Pathway
cohn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KCTCHS21_40290 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_40290 (ung)
Enzymes [BR:
cohn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KCTCHS21_40290 (ung)
DNA repair and recombination proteins [BR:
cohn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KCTCHS21_40290 (ung)
Prokaryotic type
KCTCHS21_40290 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MCM4_WHD
Motif
Other DBs
NCBI-ProteinID:
BBI34630
UniProt:
A0A3T1D969
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All DBs
Position
complement(4481310..4481999)
Genome browser
AA seq
229 aa
AA seq
DB search
MDRSLRVRLDNEWGKLLSDEQEKLYYQELVRKVEEQYLENTVYPPRSDIYRALELTSYED
VKVVILGQDPYHGANQAHGLSFSVQPGVKLPPSLRNIFKELQDDIGCPMPEHGFLEHWAK
QGVLLLNNVLTVREGQANSHRKLGWEKMTDRIISLLNERNKPIAFVLWGKHAQNKGRYID
QSKHFVLNSVHPSPLSAYGGFWGSKPFSQCNAFLKASGQAEIDWELPSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagcttgcgagtaaggttggataatgagtggggaaaattgttgagtgacgaa
caagagaagctatactatcaggagcttgttcgtaaagtagaggagcagtatctggagaac
accgtctatccgcctcgtagcgacatttaccgagcgttagagctaacttcttatgaggat
gttaaggtcgttattctggggcaggatccttatcatggggcaaatcaggcgcatggtcta
agcttctcggttcagcccggcgttaagctgcctccgtcgcttagaaatatattcaaagag
ctgcaggatgatattggctgtccaatgcctgagcacggatttctggagcactgggcgaag
cagggagtgctgctgctgaacaatgtgctgacggttagagagggtcaagctaattctcat
cgcaagctgggatgggagaagatgacggatagaataataagcttgcttaatgagagaaat
aagcctattgcctttgtattgtggggtaagcacgcgcagaataaagggcgctatatcgat
cagtcaaagcattttgtccttaattctgtgcatcccagtccattgtcggcctacgggggc
ttctggggaagtaagcccttctcccaatgtaatgctttccttaaagccagtggccaggct
gaaatcgattgggagctccctagcctgtaa
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