Cohnella abietis: KCTCHS21_40790
Help
Entry
KCTCHS21_40790 CDS
T05979
Symbol
pbpB
Name
(GenBank) penicillin-binding protein 2B
KO
K08724
penicillin-binding protein 2B
Organism
cohn
Cohnella abietis
Pathway
cohn00550
Peptidoglycan biosynthesis
cohn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KCTCHS21_40790 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cohn01011
]
KCTCHS21_40790 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cohn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KCTCHS21_40790 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
ASPRs
Motif
Other DBs
NCBI-ProteinID:
BBI34680
UniProt:
A0A3T1D9C0
LinkDB
All DBs
Position
complement(4540628..4542856)
Genome browser
AA seq
742 aa
AA seq
DB search
MTKRIKLRTLLMGGIFSLLFIGLIFRVYWVQVVKADFWSEQAMKTWITSEFLPQERGMIL
DRSGNVLAADARAYTIALGPKQIAALEAKNPEWKLTDRIVSKLHIVLGTSEERLRTIITA
KKDDGITYLVQAEVRPEGWKVDKEVKDRLDKFREELRKLTNNSDVGLYFMNEKKRYYPNG
MLASHILGYENKEGQGILGLEKKFNDDLNGLPGFIKYQKDGARTQLPDGQVEYKQPVDGK
NVTLTIDKEIQFYIEDALRTAYLKYKPISITAIAADPDTMEILGMSSMPDFNPNSYGDKK
YENSFRNHAIQSVYEPGSTFKIVTLAGAVEEGLFKPNDIYKSGSIKYSSKDKPVKDHNGG
RGWGVNGEITYLDGLKHSSNVAFVKLGYEMLGKERLIKYINNFGFGQKTGIDLPNEVSLP
YSLDFPSEVATATFGQGKVLVTPIQQVAAVAAVANGGKLMEPHIVKSITDTNTGEKTITA
PKVVRQVISEESSRKVGEYLETVISDQQIGTGHIAFIPGYRIAGKTGTAQKVTKSGKSKS
EGYSTNRYVVSFIGYAPVEKPKIVLYVVVDEPQVDNAGGGSVAGPIFKDIMGKSLLRLGI
EPKLSPAEGGGSAESPSPTPAKGVEVTDTVPKVTGMTVVQARELLKERSFPVGVLGKGDK
VLQQLPQEGSVIPASQQIYLLTDTTPGNVPDLKGLSLRDALKMCSLLKVVCTVEGEGYVV
SQKAVKTDGKWILQLKLAPPGG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacgaataaaactgcggacgctgctcatgggagggatattttccctccttttt
attggtttaatttttcgagtatattgggttcaagtcgtgaaggccgacttctggtcagaa
caagctatgaaaacttggatcacaagtgaatttctcccgcaggagcggggtatgatctta
gatcgttcaggcaatgtactggcagcagatgctagagcttatacgattgcactaggacct
aaacaaattgctgctttagaagccaagaaccccgaatggaagctgacagatcgtattgtg
tctaaactccacattgtattaggtacgtctgaagagaggctgcgaacaattattaccgca
aagaaagatgatgggattacttatcttgtccaagcggaggttcgtccagaaggctggaag
gtagataaagaagtaaaggatcgattagataaattccgagaagagcttcgtaaattaact
aataatagtgacgtcggtctatattttatgaatgagaagaaacgttattatcctaatggg
atgcttgcttctcacattctcggttacgagaataaagagggccaggggatattaggcttg
gaaaaaaagttcaacgacgatttgaatggactgcctgggtttatcaagtaccagaaggat
ggtgctagaacgcagttacctgatgggcaggtagaatataagcagcctgtggatggtaag
aatgttacattgacaattgataaagaaattcaattttatatcgaagatgcgctgagaacg
gcttatctgaaatacaagcctatcagtattactgcgattgctgcagatccggatacgatg
gaaattttaggaatgtctagcatgcctgattttaatccgaattcgtatggagataaaaag
tatgagaactcgttcagaaatcatgcgattcagtctgtgtatgagcctggctcgaccttc
aaaatcgtgactttggctggagcggtggaggagggcttgtttaagcctaatgacatctat
aaatccggttcaataaagtatagctctaaggataaacctgttaaagaccacaatggtggt
agaggctggggggtaaatggagaaatcacttaccttgatggtctaaagcattctagtaat
gtggcgttcgttaagctaggctacgagatgcttggtaaagagagattaattaaatatatt
aataatttcggttttggtcagaagacgggaatagatcttcctaatgaggtgtctttaccc
tacagcctcgacttcccttcggaggttgctacggcaacctttggacaaggtaaggtgttg
gttactccaattcaacaggttgcggcagtagctgctgttgctaatggtggtaaattaatg
gagcctcacattgtaaagtccattactgacacgaatacaggagagaaaacaataaccgcg
cctaaggtcgttcgtcaggttatctcggaagagtcatcccgtaaagttggcgaatattta
gaaacagtaattagtgatcaacaaatcggtacggggcatatcgcttttattccaggttat
cgcattgctggaaagacggggacggcacaaaaggtaacaaaaagcggcaagagtaagagt
gaggggtattctacaaatcgatacgttgtttctttcattggttatgcaccagtagaaaaa
ccaaagattgtcctttatgtcgtagtggatgagccgcaagtcgataatgccggaggtggc
tcggtagctggtccgatattcaaggatattatgggtaagtctttactccgcctgggcatt
gagcctaagctttctccagccgaggggggtggctctgcagagtcgccatctccaactcct
gctaagggtgttgaggtgacagacacagtacctaaagtgactggtatgactgttgtgcag
gcgcgtgagctgcttaaggaacggtcctttcctgttggtgtccttggtaaaggcgacaag
gtgctgcagcaattgccgcaggaagggagtgttatcccagcttcgcagcaaatatacctg
ctaacagatacaacacctggcaacgttcctgatttgaagggattgtcactgcgagatgcg
ttaaagatgtgctctctcctaaaggttgtctgtacggttgagggcgagggctatgtcgta
agtcaaaaagcagttaaaacggacgggaaatggattcttcaactaaagcttgccccccct
gggggctga
DBGET
integrated database retrieval system
