Cohnella abietis: KCTCHS21_41400
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Entry
KCTCHS21_41400 CDS
T05979
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_41400 (addA)
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_41400 (addA)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KCTCHS21_41400 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
BBI34741
UniProt:
A0A3T1D9F9
LinkDB
All DBs
Position
complement(4600512..4604465)
Genome browser
AA seq
1317 aa
AA seq
DB search
MKQMREWPIKPENSRWTDEQWAAINADGSNLLVAAAAGSGKTAVLVERMISRIADENRPL
DVDAMLVATFTKAAAAEMKERIRHALEEALEKNPDSRHLRRQIALLPRAFVTTLHSFCLE
IVERYAPLIELDPGFRMANVTEAELLRMDTLDELFEQRYESEGELGPLSSLADRFGGERS
DEPLHRLVLELHEFAGSHPWPEYWLQQMASQFEEAQADTLLHSLWVKSLRDDAVLLLQGA
LHMLRGALRIAHEPGGPEPYIDTLFADIDGLERVAEAFYQGTWEDWQAAAADISFGRLKA
CKGDEYDVSLIERVKGLRDAAKKAAGRLSEEWLVRSPEQYAAELHSLAPAMEQLAELAVQ
FGERYEQAKRAKGLLDFGDLEHYALRILRDASSTPEQSVPSLAALNFRDRFSEIYLDEYQ
DTNEVQEAIVALIARKEPGNVFMVGDVKQSIYRFRLAEPGLFLNKYKTYEAFTSLFSEEG
NASTDSGSETFASDPDGLRIDLAKNFRSRREIVNAVNHVFQLIMHEPVGEMNYDERAELI
YGEGYPDADKSNPYRVELILLDSAAVKSENSSQGPAAEGAGTEAGESGASTTEGITEETE
DVEAAQLEARCIAEEIRKLMVADGDDQQRFAVYDGKSKLYRPVQYRDIVILLRAVTALAP
AFIDELKAAGIPAYADLATGYFAATEVDILLSLLSIIDNPHQDIPLAGVLRSPIAGFTAE
QLAQIRLARRNGSFWEAVQAASRSGDDAIDEDGHNVYGEGLHQALAAFVRKLDEWRDFAR
REPLGDLLWMLYRETGYYDYVGGLPGGGQRQANLRALVNRAVQYEQSSRFRGLFRFLRFL
GRMRDTGADLGAARALGESENLVRIVSIHRSKGLEFPIVFAAGLGRNFNRRDLNGAFLKH
KKLGFGPRMLEADTRVTYPTLPQLAIRRKLAAEMLAEEMRVLYVALTRPKEKLYLVGTSK
DASKQWEQWCETAAMADKGLPPYAVAAASKYLDWLGPAAVLASEVADPMRQWVCRIVPAV
TFTRQVEEKHDSNPSEGQLWNTVLDGEKVELTENETSDQVARILSWQYKDIAASQVAAKT
SITAMKNQIQLASSMPYSSVSSPDDSQERHEAEGWSEEDGQLPNVRGPSTFQLRRPRFMS
ARKMTAAERGTAFHLVMQHLPIEEGTTAEHIALLLERLVERKILSAEQREGVDASAVAGF
CHTPLYNRLCKASRVWREIPFTYGLEADRVYPGLIEASSEETVIIQGVIDCLFAEDEGLV
LIDYKTDVLKGSSALDAAEKHRFQVERYSEAIGHIMGIPVKEAYVYFFDGGETVRLK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagatgagagaatggcctattaagccagaaaatagtcgttggacggatgagcaa
tgggcggccattaacgcagatggttctaacctgcttgtagcagcagcagctggttctggt
aaaacagcggtgctcgttgagagaatgatatcaagaatagcggatgagaatcggccattg
gatgtagatgctatgctcgtagctaccttcacaaaggcagctgcagctgagatgaaggaa
agaattcggcacgctctggaggaggcgctggagaaaaatccggattcccgacatttgcgc
cggcagattgctttgcttccaagagcatttgtgacgacgttacattccttttgcttagaa
atagtagaacgttatgccccacttatcgagctagaccccggctttcgaatggcgaatgta
acggaagcggagcttctacgcatggatacacttgatgagctgtttgagcaacgctatgag
agcgaaggggagttaggaccgctgtcgtcacttgctgaccggttcggtggggagagaagc
gatgagccactccaccgccttgtgttggagctgcatgaatttgctggaagtcacccttgg
cctgaatattggctacagcagatggcaagtcagtttgaggaagctcaagcagatacgcta
cttcactcattatgggtcaaaagcttgcgtgatgatgctgttttattgctgcaaggagcg
ctgcacatgttaagaggcgccttgcgaatagctcatgagcctggtggcccggagccgtat
atcgatactttatttgccgatattgacggtcttgaaagagtcgctgaggcattttaccaa
gggacgtgggaggattggcaagccgctgctgcggacatctctttcggacggttaaaagcc
tgtaaaggtgatgagtatgacgttagcttaattgagcgagttaaaggtttgagagatgcc
gcgaagaaagccgcaggaaggctatctgaggagtggctcgttcgctctccggagcaatat
gctgcagagctccattcactagctcctgcaatggaacagctggctgagctggctgtacaa
tttggtgaacgctacgagcaagcaaagcgggcgaagggcttattagatttcggggatctg
gagcactatgcgttgcgtattttgcgtgatgcttcttcgacgccggagcaaagcgtaccc
tcattggcagcgctcaatttccgcgatcgattctcagaaatttatttggatgaataccag
gatacgaacgaggttcaggaagctattgttgcccttattgctagaaaagagccaggcaat
gtatttatggttggcgatgttaaacagagcatttaccggtttcggttggcggagccaggt
ctgttcctaaacaaatacaaaacctatgaagcctttacttcgctattttcggaggagggt
aatgcttctactgattcaggctccgaaacgttcgcaagcgatcccgatggattacgcatt
gatttggccaaaaatttccgaagtcgccgggaaatcgtcaacgcggttaatcatgtgttc
cagcttattatgcatgagcctgtaggggaaatgaattacgatgaacgagctgagctcatc
tatggggaaggctaccctgatgcggataagtcaaatccataccgtgtagaattgattttg
ttggactcagcagcagtgaaatccgaaaatagctcccaggggcctgctgctgagggggca
ggcactgaagctggtgaaagtggggcgtccacgaccgaggggataacggaggaaacagag
gacgtagaagcggcacagctagaggcgagatgcattgccgaggaaatacgtaagctgatg
gtagcagatggtgatgaccagcagcgattcgcagtctatgatggcaaatcgaagctgtat
cgaccagtgcaatatagagacatcgttattttgttgcgtgcggtaacagcgctagctcct
gctttcatagacgagctgaaggctgcaggcattcctgcttatgctgatttagcgacgggt
tattttgccgctactgaggtggatattcttttaagcttgctttcaataattgataatcct
catcaggatattcctctagcaggtgtactaaggtcgccaatagcaggctttacggctgag
caattagcccaaatacgtctggctagacgaaatggctcgttctgggaagctgttcaagct
gcctccagatcgggagacgatgctatagacgaagatggacacaatgtgtatggagaagga
ctgcatcaggctctcgcagcattcgttcgcaagctggatgaatggagagactttgcaaga
agagaaccattaggtgatctgctttggatgctgtaccgtgaaacgggctattatgactat
gtaggcgggctaccgggcggagggcagcggcaagccaatttgcgggctcttgttaatcgt
gcagtccagtatgagcagtcctctcgattcagaggcttattccggtttctacgctttctg
gggaggatgcgagataccggggctgacttaggtgcagcgcgcgcactcggagagagtgag
aacctcgtacgtatcgtatccattcatagaagcaaggggcttgagtttccgattgttttt
gcggcaggacttggcaggaattttaatcgaagagatttaaatggagctttcctaaagcac
aagaagcttggctttggtccaagaatgctggaagctgacactcgtgtcacttatccgacg
ttgcctcagctagcgatccgtcgaaagcttgcggcagagatgctggcagaggagatgcgg
gtgctctatgtggcgcttacacgccctaaagagaagctgtatctagtaggaacaagcaag
gatgccagcaagcaatgggagcaatggtgtgaaaccgcggcaatggctgataagggactc
cctccttatgctgtggcggcggcgagcaagtacttagattggttaggaccagcggctgtc
ctagcaagtgaagttgctgatcctatgcggcaatgggtgtgtcgtatcgtgcctgcggtt
acttttacccgtcaggttgaagagaagcatgattcgaacccaagcgagggacagctttgg
aatactgttttagacggtgaaaaggttgaattgaccgaaaatgagacgtctgaccaagtt
gcccgtatattatcttggcagtacaaggatatagcggcttcacaggtcgcggcaaagact
tccattacggccatgaaaaatcaaattcagcttgcgagctcaatgccttactcatcggtg
tcttcacctgatgattcgcaagaacggcatgaagcagaagggtggtcggaggaggatggc
cagcttccgaatgttagggggccatctacctttcaattacgtcgcccaagattcatgtct
gctcgcaagatgactgctgcggaacggggaacggcttttcatttggttatgcagcatctg
ccgattgaagaaggaacgacggctgaacatatagcattgctgcttgagcggttagtggag
cgcaagattctttcagcagagcagcgggagggtgtagacgcttccgctgtagcaggcttt
tgtcatacgcctttgtataatcgcttgtgcaaagcatctagggtgtggagggaaattccc
tttacttatggtcttgaagcagaccgggtctatcctggtttaatcgaagcgtcgtctgag
gaaacggtcatcattcaaggggtaatagattgcttattcgctgaggatgaagggctcgtg
cttatagattacaaaacggatgtgcttaaaggctccagtgctttggatgcagcggagaag
caccggttccaggtagagagatacagcgaggctattggacatattatgggtattcctgtt
aaagaggcttacgtctatttctttgacggtggggaaaccgtacgtctgaagtaa
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