Cohnella abietis: KCTCHS21_41410
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Entry
KCTCHS21_41410 CDS
T05979
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_41410 (addB)
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_41410 (addB)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
KCTCHS21_41410 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BBI34742
UniProt:
A0A3T1D9G7
LinkDB
All DBs
Position
complement(4604462..4607998)
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AA seq
1178 aa
AA seq
DB search
MSLRLITGRSGSGKTTYCLDEIRGKLLQDSQGAPLILLVPEQATFQAEYAMVTTPGLNGF
MRAQVLSFRRLAFRIMQETGGSAVIPIHDNGKAMLLHKVLEARRESLRLFRGGKAETGLI
SRINDLLTEMKRYGISSAKLSEQAVAAANQAERHKKTSLLADKLHDLSMIYSEMEQQLVG
HWLDGEDMLGWLAKGAESSSFLKGSEIWLDGFHGYTPNEYAVIEALVKKADKVSVTLCLD
QPYGAGERPDELDVFHPTAETSAQLCEIAQLAGVKLEAPLVLNPEVLPRFKDNPMLAFLE
QNWSNRRQWNGDEMLLQPEHPLCGLSLHAAVNRRAEAEAVARDMLRRVREEGSRWRDMAL
FIRRIEDYGDLLAAVFGDYGIPYYLDGKKSVSHHPFVEFIRSALECVTGGWKAEAVFRCA
KTDLLGTPDRLITRDEIDRLENYTLAAGIDGWRWKSPQAWFSLYRGDLEEEGVSSRAEET
MKELLEVRDALLKPLLSLEERMNSAGSTRELCESLYYFLEDTGAADKLESWSREDSSDGK
PGKMAVHRPLWDGVIHLLDQLVELMGEQSPDLPLFAGMVDSGLEELKLGAVPPSLDSVLI
GSPERTRSDRVQVVYLLGVNDGVLPMRISENGLLAEEERDQLAVTGLSMAPDSRRRLLDE
SFLAYLTLTTASRHLWVSYPLADEEGQGLLPSEWIGKLKKRFPGIPVQKIAAEPQETQSD
AEQLDFAVHPGRAITHLLTRLRSWRQGETLTAGWWSVYNWLREQEGWKHRLSSLISSLNY
TNEEKPLAPETSRLLYGDRLLASVSRMERFIACPFQHFAVHGLKLQERRLFRVDSPDIGQ
LFHAALRQTTEKLFAEGQAGMDALRWQIEAAAAVDKLLPRVQSQILLSSNRHQVMARKLR
DIVMQASTILGEHAALSAFKPVGLEMSFGPQGLLPALSFELDGGRWMDIAGKIDRVDAAQ
SSSGLLLRIMDYKSSAMKLRLDEVAHGLSLQMLTYLDVVVSHAPHWLGQPAKPVGVLYFH
VQNPLLLTPNGMPKDEAKNALFREYRMQGLLLSDGESVKLMDESLNQANKSAVVPVEFKK
DGTFSARSQVANQSEWEVLRGSVRSQIRRIGKRIIDGDVAITPYRLDKRSPCTYCDFRPV
CHFDSQVEGNAYQSLHKPGSREELWQRLANEAQGREPY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcggcttattacgggacgttccggaagcggaaaaacaacatattgcttggac
gaaatacggggcaagctgctgcaggattcacaaggtgcacccttgattttacttgtccca
gaacaggcaacgttccaagccgagtatgccatggtaacgactcctggacttaatggattc
atgagggcgcaggtactgagctttcgcaggcttgcctttcggattatgcaagagacgggt
ggatcagcagtcatcccgattcatgacaacggtaaagcgatgcttttacataaagtgctg
gaagctcgtagagaaagcttacgtttatttcgtggtggcaaggcagagacaggacttatt
tctcgcattaatgaccttctaaccgagatgaagcgttacggcataagcagtgccaagctt
tcagagcaggcggtggctgcagcgaatcaggctgagcgtcataagaagacatcgctttta
gcggacaagctgcatgatctttctatgatttactccgagatggagcagcagctcgtcggt
cattggctagatggggaagatatgctgggctggttggctaaaggcgcagagagctcctcc
ttcttgaaaggatcagaaatatggttggatggctttcatggctatacccctaacgaatat
gctgttatagaagctcttgttaagaaggcggacaaagtgtccgtcactctatgtttagat
cagccttatggagcgggagagcgaccagacgagttagatgtatttcatccgacagcagaa
acctcagctcaattgtgcgaaatagctcagttggctggagtaaagctagaagcgcccctc
gtccttaatccagaagtgcttccacgcttcaaggacaatccaatgctagcttttcttgaa
caaaattggagcaaccgtagacaatggaacggggatgaaatgcttttgcagcctgagcat
cctctgtgtggactttcattgcatgcagcagtcaatcgtagggcagaggctgaagccgtt
gccagagatatgctgcgccgagttagggaagaaggaagccgctggcgggacatggcctta
ttcattcgacgtatagaggattacggagatttgttagctgccgttttcggagactatggt
atcccttattatcttgatgggaaaaaatctgtctctcaccacccttttgttgagtttatc
cgttcagctctagagtgcgtaaccggcggctggaaagcggaagctgtatttcgctgtgcg
aagacagatttacttggtacacctgacaggctaattacccgcgatgaaatcgaccgattg
gaaaattacactttagcggcgggtattgatggatggcgttggaagtccccccaagcttgg
ttttcgttgtatcgaggagatttggaggaagaaggagtctctagtcgtgccgaggagacg
atgaaagagctgctagaggttcgggacgcactgttaaagccattgctttccttggaggaa
agaatgaattcagcgggctctacaagagagctttgtgaaagcttatattattttcttgag
gatacaggtgctgcggataagctcgaaagctggagtagagaggacagctccgacggtaag
ccaggtaaaatggcggttcatcgtcctttatgggatggggtcattcatttattagaccag
ctagtggagctaatgggtgaacaatccccagatttgcctctgtttgctggaatggttgac
tctggcttagaggagctcaagctaggcgccgttcctccgtcattagatagtgtcttgatt
ggaagccctgagagaactcgctctgatcgcgttcaggtcgtttatttgctgggcgttaat
gatggcgtgctcccgatgcgtatttcagaaaatggattgctcgcggaagaagagagggac
caactggcggtgacgggactgtccatggctccggactcgagaagacggttgttagacgaa
tccttcttggcttatttaaccttgacgactgcatcccgtcacctgtgggttagctatccg
ttagccgatgaggaggggcaaggcttgcttccgtcggagtggatagggaaattaaagaaa
aggtttcccggcatccccgttcagaaaattgcagctgagccccaagagacgcaatcggat
gctgagcagcttgattttgctgtacatccgggaagagcaattactcacctgctaactaga
ttaagaagctggagacaaggggaaacacttaccgctggttggtggtccgtctataactgg
ctcagggagcaggagggctggaagcatcggctgagctctcttatttcatccttgaattat
acgaatgaagaaaagcctcttgcgccggaaacaagtcggttgctttatggggacaggctc
ttggccagcgtatcccggatggaacgttttatcgcatgtccattccagcattttgccgtg
catggcttaaagctgcaggagcgtcgtctatttcgggttgattctccagatatcggtcag
ctgtttcatgctgctcttcgtcagacaacggagaagctattcgcagaaggacaagcgggg
atggatgccttacgctggcaaatagaagccgctgcagcagtagacaagctgttacctcgc
gttcaatcacagatcttattgtcctcaaaccggcatcaggttatggcgcgcaagcttcgt
gacattgtgatgcaagcttccaccattctgggtgagcatgctgcattgtctgcttttaag
ccagtcgggctcgagatgagctttggtccgcaaggcctgctaccagcattgtcgttcgaa
ttggacggaggtcgctggatggacattgcaggtaagatcgaccgagttgacgcggcgcag
tcctcatcaggtctgctcttgagaattatggattacaagtctagcgcaatgaaactgaga
cttgatgaggttgctcacggcttatccttgcaaatgctgacctatttggatgtcgtcgtt
tctcatgcgccgcattggcttgggcagcctgccaagcctgtgggagtgctatattttcac
gtgcaaaacccgctactgcttacacctaacggaatgcctaaggacgaagccaaaaatgct
ttgttccgtgaatatagaatgcaaggcttgttattatcggatggagaatccgttaagcta
atggacgaatctctgaatcaagctaacaaatcagcggtcgtgcctgtggaattcaagaag
gatggtaccttctcggcgcgatcgcaagttgcgaaccagagtgaatgggaggtgctgaga
gggtcagtacgctcgcaaattcgcagaattggcaaacgaattattgatggggacgttgct
attacaccgtatcggcttgataaacgtagtccatgcacgtattgtgatttccgacctgtt
tgccattttgatagccaggttgaaggtaacgcctatcagtcactacataagcccggaagc
cgggaggaattatggcagcggctcgcgaacgaagcgcaagggagggagccttattga
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integrated database retrieval system
