Cohnella abietis: KCTCHS21_42510
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Entry
KCTCHS21_42510 CDS
T05979
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohn
Cohnella abietis
Pathway
cohn03420
Nucleotide excision repair
cohn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTCHS21_42510
03430 Mismatch repair
KCTCHS21_42510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_42510
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_42510
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTCHS21_42510
MMR (mismatch excision repair)
Other MMR factors
KCTCHS21_42510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
GAE_BBS1
Motif
Other DBs
NCBI-ProteinID:
BBI34852
UniProt:
A0A3T1D9T3
LinkDB
All DBs
Position
complement(4730827..4732932)
Genome browser
AA seq
701 aa
AA seq
DB search
MLASPGSGKTTTLIMRIGYLIEEKNVSPSRIKAVTFSRASAQDMRERFNRFFPNHIGSSV
DFSTIHSFAFEVVRNHFHKTNTPYQMIEKTTESAGQGDVLHEGTPLHKQRILRDLYKKVN
NDNLTDDQMEDLTSYISFIKNKLISMDKLSEVKCDVPKAEAIFKEYERFKQSGTAQLLLD
YDDMLTIANDALTKDRSLLRKYQGRFDYVLTDESQDTSLVQHAIIEKLVREHGNLCVVAD
DDQSIYAWRAAEPQYLLDFKQIYPHAALLKMEQNYRSSPDIVDVANRFIKRNKNRYDKNM
FTLNEKHSPITITDLPDYRYQAKYVVEKIADKANLDEIAVLYRNNSSSIMLMNALDRAGI
PFYMKDGDNRFFSHWVVEDMLNFMRMTFNDKRPDILEKIHTKFNGYITKQQMAKLMELEV
GESVFDTLLQHVPLQEYQIKQIQNGKETLIQMQGAKPLAAIQTIRDKLGYDKAIEKMCER
LGFRKEYLVGILNTLEEIAEPLDTMEQFAKRLKFLEKNMKDSKYNKNGSAVTLSTLHSSK
GLEFKHVYMIDLVEGVIPSNDDNKKFEKGQHMEMEEAVRLFYVGMTRAKSGLELLSYKKK
DGENVRQSQFVTEVSNIQDPPKEIPSKPAGKRARTVKKQEHPYNPNAFKEITQFAVGKKV
QHRVFGNGEIIEVDGDSVEIRFASIVKRLSVNICIEMGLLE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgcttctcccggatcaggtaaaacaacgacacttattatgcgaatcggttatctt
atcgaggagaagaacgtaagcccttctcggattaaggctgtgacattcagtcgggcatct
gctcaggacatgagggagcgattcaatcggttttttcccaatcacatcggtagctctgtc
gacttttccacgattcatagcttcgccttcgaggttgtaaggaaccattttcataaaacg
aataccccataccagatgattgagaagactacggagtcggctggtcagggcgatgttttg
cacgagggcacacccttacacaagcaaagaatactgcgggatctatataaaaaggtgaat
aacgataacctgactgacgatcagatggaagacctcaccagctatattagctttattaag
aacaagctgatttcaatggacaagctatcagaagtcaaatgtgatgtgccaaaagcggaa
gctatttttaaggaatacgagcgattcaagcagtcaggcactgcccaattgctattagat
tacgatgatatgctcacaattgctaatgatgcactaacgaaggatcgctctcttctgcga
aagtatcaggggagattcgactatgtgctgacggatgaaagccaggatacgtcgctcgtt
cagcatgccattattgagaagctcgttcgagagcatgggaacctgtgtgtcgttgcggat
gatgaccaaagcatctatgcatggcgtgcggccgagccgcaatatttgctcgatttcaaa
caaatatatccccatgcagccctgctgaaaatggagcaaaactatcgttcctctcccgac
attgtggacgtagcgaaccgttttattaaacgcaataaaaatcggtacgacaaaaatatg
ttcacactaaatgaaaagcacagtcctataacgattacagacttgccggactatcgatat
caggcgaaatacgtggtcgagaaaatcgctgacaaagctaacctggatgagatagctgtg
ctgtatcgcaataactcctcctctattatgcttatgaatgcgttggatcgtgcaggaatt
cctttctatatgaaggacggagacaatcggtttttctcccactgggttgttgaggatatg
ttgaattttatgcggatgacctttaatgacaagcgaccggacattttagagaaaatccat
accaaattcaatggttacatcaccaaacagcagatggcgaagctaatggagctggaagta
ggcgaatccgtattcgacaccctacttcagcatgtccccctgcaagagtaccaaattaag
cagatccagaatggtaaagaaacacttattcagatgcagggggcaaagccacttgcggcc
attcagacgatcagagataagctcgggtacgataaagcgatcgagaaaatgtgtgagcga
ttaggatttcgcaaggagtatctcgtcggaattctgaatacgttggaggaaattgcggag
cctctggatacgatggagcaattcgccaaacgactgaaatttctagaaaagaacatgaag
gactcaaagtacaataaaaatggtagtgcagtgacgttatccactcttcacagctctaaa
ggcttggagtttaagcacgtctatatgattgatctggttgagggggttattccttccaat
gatgacaacaagaaattcgagaaaggtcagcatatggaaatggaagaggcggttcgtctg
ttctatgttgggatgactagagccaaaagcgggcttgagctgctttcctacaagaagaag
gatggcgagaatgtccgacaatcgcaattcgtgacggaagtaagcaacattcaggatcca
cctaaagaaattcctagtaagccagctggaaagagggcgcgtacggttaagaagcaggag
cacccttataatcccaatgcctttaaggaaattacacaatttgcagttggaaaaaaagtg
cagcatcgcgtgttcggtaacggtgaaattatagaagtggatggcgatagcgtcgaaatt
cggttcgcgtccatcgttaagagattgtcggtaaatatttgcatcgagatgggtttgctg
gaatag
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