Cohnella abietis: KCTCHS21_43210
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Entry
KCTCHS21_43210 CDS
T05979
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cohn
Cohnella abietis
Pathway
cohn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KCTCHS21_43210 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_43210 (mutM)
Enzymes [BR:
cohn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KCTCHS21_43210 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KCTCHS21_43210 (mutM)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KCTCHS21_43210 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-C4pol
RNHCP
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
BBI34922
UniProt:
A0A3T1D9Z3
LinkDB
All DBs
Position
complement(4819245..4820168)
Genome browser
AA seq
307 aa
AA seq
DB search
MPELPEVETVRRTLSQLITGKQIDRVTVSLPRILQKPDDPLVFAAQLEGRTFQSVERRGK
FLRLVMDGLVLVSHLRMEGRYGLFDSETLPEKHTHVIFHFTDGTELRYKDVRQFGTMHLF
MPGEELQAPPLNKLGLEPLEEGFTLEVFRRALGKRSTKIKPLLLNQEVVVGLGNIYVDEA
LHMAGIHPETSANELKRKEQELLHLAIVETLSAAVEAGGSSIKSYVNGQGEMGLFQHSLK
AYGRTGEPCLNCGNLIEKSVVGGRGTHICPKCQKQPHNNISKSDSNSMNTLKQRNNKVKD
RLDGLDN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcctgaggttgaaacggtccgcagaactttaagccagctgattacaggt
aaacaaattgatcgggtcacagtaagcttgccgcgaattcttcagaagccggacgatcct
ttagtgttcgcggctcagcttgagggtagaacctttcaatcggttgagcgtcggggtaag
tttttacgattagttatggatggactcgtccttgtttcccatcttcggatggagggacgc
tatgggctatttgactcagaaacgttgccggagaagcatacccatgttattttccatttt
accgatggtacagaattacgttataaggatgttcggcagtttggaacaatgcatttgttt
atgccaggagaagaattacaagctcctccgctgaataaactgggattggagcctttggaa
gaggggtttacgctggaagtgttccggcgtgcactcggcaaacggtcgacaaagatcaag
ccgctgttgctcaatcaagaagtcgttgttggattgggtaacatttacgttgatgaagcg
ctgcatatggcgggtattcatccggagacgtcggccaacgagttaaagcggaaggagcaa
gagcttctccatcttgcgatcgttgagactttgtcggctgctgtggaagccggaggctcc
tccattaaatcctatgttaacggtcaaggtgagatggggttattccagcatagcttgaag
gcttatggcagaacaggtgagccttgtctgaattgcggcaacctcatagagaaatcagta
gtaggtggtcgaggtactcatatttgtccaaagtgccagaagcagccacataataacatc
agcaagagtgattctaacagcatgaatacgctaaaacaacgtaacaataaggtcaaggat
cggttagatggtttagataattag
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