Cohnella abietis: KCTCHS21_43830
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Entry
KCTCHS21_43830 CDS
T05979
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
cohn
Cohnella abietis
Pathway
cohn00190
Oxidative phosphorylation
cohn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
KCTCHS21_43830
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KCTCHS21_43830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cohn03019
]
KCTCHS21_43830
Enzymes [BR:
cohn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
KCTCHS21_43830
Messenger RNA biogenesis [BR:
cohn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KCTCHS21_43830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
CFAP47
COR-B
Motif
Other DBs
NCBI-ProteinID:
BBI34984
UniProt:
A0A3T1DAD1
LinkDB
All DBs
Position
complement(4889131..4891212)
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AA seq
693 aa
AA seq
DB search
MTSAKNYINRDLSWLEFNRRVLEEAEDPGTPLLERFQFLSIVQSNLDEFMSVRVAGLQAQ
SRAGYTKTDFTGYTPQGLIKRLMKRTTRMVREQYRSYRELIRILGKEGVMLSTFRDLNEE
QKTLMTKYFQQIIYPVLTPMAVDQSRPFPLLHSKGLYLAVVLQQDDLRNDSDSRSFCAIV
QVPTILTRTVLVPGRKGSRKFTYLLLEDLIKEHIGLLFSGYTVEAVHAFRVTRNSDLTLN
EEGSEDLLQEIEKELRRRRRGLPVRLEVEKGIHPHAMELLQDELEMEDVVFDEIDGPLDL
AFLSKFVSMLPNYDHLRYSKVDPIYPDEFEEAEDMLSVLREKDVLVYHPYESFEVVNDFI
LEAAADVDVLAIKMTLYRVSVNSVLVQALASAAESGKQVTVVVEIKARFDEARNIAWARQ
LEKAGCHVVYGLVGLKTHAKITLVVRREADTLRRYVHVGTGNYNENTAKLYTDVGLFTSH
PDIGADATALFNEMTGYSTPHQWSSFAVAPIGLKPKLFELIDREIEHAIAGRPAKIIAKM
NSLSNQSMIDKLYEASQAGVKIDLIVRGVCCLRPGVIGLSDNIRVISIVDRFLEHARILA
VGGGGEEELFISSADWMTRNLSRRVELMCPVKDPGPRQMLMNLLQMNLQDNVKARELQSS
GSYVRVTSPHAPLRSQFEAADIPLWKSIASAIE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgactagcgctaaaaattacattaatcgggatttaagctggctggagtttaataggcgt
gtgcttgaggaagcagaggatccaggaacgcctctacttgaacggtttcaatttctatcc
atcgtgcaaagtaacttagacgaatttatgagtgtaagggtcgcaggattacaagcacaa
agcagagcaggatatacaaaaacagattttactggctataccccacaaggactaattaaa
cgattgatgaaacgcacgacccggatggttcgagagcaataccgttcctaccgtgagctt
attcgcatacttggcaaggaaggtgtcatgctatctaccttccgtgatctgaatgaagaa
cagaaaacattaatgactaaatattttcaacagatcatttatcctgtattaacgccaatg
gctgttgaccaaagtcgtccttttccacttttgcatagcaaagggctctatttagcagtt
gttctgcaacaggacgatttgaggaatgacagtgactcaagatcattctgtgcaatcgtt
caagtacctacaattttgactcgtacagtattagttccgggtcgcaaaggcagccgtaaa
tttacttatttgttgctggaggatctcattaaggaacatatcggtttattatttagtggc
tacacggtcgaagctgttcatgcgttccgcgttacacgtaattcagatttaacgcttaac
gaagaaggctcagaggatttactgcaggaaattgagaaggagctgcgtcgtcgtcgccgt
gggctacctgtaaggcttgaagtagaaaaagggatacatcctcatgcgatggagcttctg
caagacgagctggagatggaagacgtagtattcgatgaaatcgatggaccgctcgatctc
gcattcctttcgaaattcgtctccatgcttcctaactacgatcatctcagatactcaaag
gttgacccaatctacccagacgagtttgaggaagcagaggatatgctatctgttctccgt
gagaaagacgtcttggtatatcatccgtacgaatccttcgaagttgttaatgacttcata
ttagaggccgcagcagatgtagacgtgttggctattaagatgacgctctatagagttagt
gttaattcagtgcttgttcaagctttggcgagcgcggcggagtcaggcaagcaggtaacc
gtagttgtagagattaaggcgagatttgatgaagcgcgcaacattgcttgggctcgccag
cttgagaaggcaggctgccatgttgtatacggcttggttggtttgaagacacatgcaaaa
attacgttagtcgttcgaagagaagccgatacactgcgaagatacgtccatgtagggacg
gggaattataacgaaaatacggctaaattatatacggacgtagggttgttcacaagccat
ccggatattggagctgacgcgacggctttgtttaatgagatgacggggtattctactcct
catcaatggtcttccttcgcagtggccccgattggtttgaagcctaagctctttgaactg
atcgatcgggaaatagagcatgccatagctggtcgaccagcaaaaatcattgcgaagatg
aactccttgtcaaaccagtcaatgatagacaagctttatgaagcctctcaggcaggggtg
aaaatcgatttaatcgtgcgtggagtatgttgcttgagaccaggagtaatcggtttaagc
gataatatccgggtcattagcattgtagaccgttttctagagcatgcgagaatattggct
gtaggaggcggtggggaagaagaattgtttatctccagtgcggattggatgacgcggaat
ttaagtcgcagggtggagctaatgtgcccggtaaaagatccaggtcctcgtcagatgctg
atgaatttgctacaaatgaacttgcaggataacgtcaaggcgagggagctacagtcgtca
gggagctacgtgcgagtgacaagcccgcacgcacctcttcgcagccagttcgaagctgcg
gatattccattgtggaagtcgattgccagtgctatagagtaa
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