Cohnella abietis: KCTCHS21_49650
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Entry
KCTCHS21_49650 CDS
T05979
Name
(GenBank) hypothetical protein
Organism
cohn
Cohnella abietis
Pathway
cohn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KCTCHS21_49650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Big_2
S-l_SbsC_C
DUF4073
DUF4859
CBX7_C
Motif
Other DBs
NCBI-ProteinID:
BBI35566
UniProt:
A0A3T1DBR0
LinkDB
All DBs
Position
complement(5561443..5567232)
Genome browser
AA seq
1929 aa
AA seq
DB search
MIPNMNRRMEKKNDRFRKTAYLLLAVILWIPLLASGGGKAAAAGGWSMIDGGGPNGLNVT
STNLAEYPALAAWNGEVYVAWQEKIVGNNPNQIRVKKFDSTGWKSVDGNGPYGINMAPGI
AGTQPTMAVYDDALYVAWVEGVTSSLGKIRVKKYSSAGWSPAEGSLTGINYDGNNGANSP
TLVVYKNALYASWIEASKLRVKMYTGGEWASVDGGAEGLNKDPNKAAAFPALAVLGNDLI
AVWSEQYGSIYQLRAKKYNGTSWTPIDGNGVTGLNIKTDKSAYSPSLIAADGDLYAAWNE
PVDATNDDQIRVKKYDGNVWTSIDGNGKNGINVDPSFRAYQVKLAVVNHEVHAVWSENWG
WVGSTAVFKIRAKKYNGSVWTSAEAGLNGFVADSSKAAFNPAITTLNNATFVAWQEKNTS
VEQIRVNYMPAPAVNSVTVTPPSPISLAQGGSKQLQASVDAQGGAATTLTWTSSDSSSKV
AVDGTGNVTVAADAAPGDYTITATSTFDNSKKATVTIKVLLPAVISVSFSQGSASIQQGL
YRQIGFTVNVVEGTPKTLNWTSSDVSNKVAVNGTGLVTVASDAVPGSYTITATSTFDNSK
KATMTITVTAAPAVNSVTVTPATYSVVQGGSKQLAVMVDAAGGATTNVTWSSSDASNKVA
VSGTGNVTVAANAVPDDYTITATSTFNNSKKGTATITVTAAPVAEARPAAQIDYAAEQLT
GLVPNGAYTIKGTAVTADSNGKLEIDGSWLGTTVNVVKKGNGTTTIDSLAQALSLPARPA
TPTAGKTDETSINGNDGTLTNVTSAMEYKKGTSGSWADVTGTSVTELEPDTYSVRFKATS
SAFASQAQLVTISTFGLSPEATPVAVIDYAGEQLTGLVPNASYTIKGTAVTANSNGEVTI
DESWLGTTVNVVKKGNGTTSIDSVAQALILPVRPATPTAGKTDETSINGNNGSLTNVTSA
MEYKKGTGGSWQDLTGTSLTGLEPDTYYVRAKATSSAFASVAQTVTIAAFNASHESTPVA
VIDYAGEQLTGLVPNAPYTINGTDVTANSDGEVTIDESWLRTTVNVVKKGNGTTTTDSAA
QTISLPARPATPTAGKTDETSINGNNGTLTNVTSSMEYKKGTGGSWTDVTGTSLTGLEPD
TYYVRVKATSSAFASESQQVTISTYGSLPEATPAAGIDYAAEQLTGLEPNETYTINGTTV
TADGNGKVAINGSWLGATVNVVKKGNGTTTTDSAEQTLSLPARPAAPVDITVTDVTYNGA
NDGSILNLNLTMEYKKGNTGTWTNTSGTSEVGLEPGVYYVRVAATQTAFASIPAQVTIHD
SGATIPAAPNVNADDASNVIVGLDTTMEFSVDGGAYVRYNGTNMPQLSGEHTVLVRVAAS
GSVPAGPSTTLIFTTNVSVPAGGLTVTAGDPSGSANDGKTRITVTPGVNGEHRLVYFNFG
SGTVKVPNVGDTLSGYSNVPSDLLIPAANGDKIGIAEVDAQGRVVKFGQTAAIVIVEQSG
PQPTNGTSTDTNEEAVDVLINGKVENAGKATTTESVGIKTTTVVVDPAKLKAKLESEGVN
AVVTIPVKSASNVIVGELNGQMVKNMENLSATLVLQTSKGTYTLPAKEINIDEVAGKFGS
NVKLDDIQLKISIAQTSDTMAKVVKNAEAEGKFSVVVPALDFTVTGTYGGKTVEVTKFNV
YVERMVALPEGIDPNKITTGVVVEPDGTVRHVPTKIVVIDGKHYAQINSLTNSTYSVVWH
PLEFLDVANHWAKSAVNDMGSRMVIDGTGNGLFSPGRDITRAEFAAILVRGLGLKLENSS
TVFSDVKTSNWFSSAINTAYSYKLIEGFENGTFRPNDKITREQAMMILSRAMAITGLKAK
LSTQSDDTTLRSFRDELNVSGWAHSSVIDSVQAGLVSGRSATELAPKAFITRAEVATIIQ
RLLQTSGLI
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
ttgatcccgaatatgaatcgaagaatggaaaagaaaaacgatagatttagaaaaacggcc
tatctattactcgccgttatcctatggataccgcttctagcgagcgggggcggcaaggct
gctgcagcgggggggtggtcgatgatcgacggaggcggtcctaacggactaaacgtaact
tcaactaatttggcggaatatcctgctctggccgcatggaacggcgaagtttatgtggcg
tggcaggaaaaaatcgtgggcaataaccccaatcaaatcagagtcaagaaatttgacagc
acgggttggaagagcgtcgacggcaacggtccatacggaataaacatggccccagggatt
gctggaacgcaaccgactatggccgtttacgacgacgccttatatgtcgcatgggtcgaa
ggggtcacatcgtctctcggtaaaattcgggtcaagaaatatagcagcgcaggctggtct
ccagccgaaggaagtttgaccggaattaactacgatgggaacaatggcgctaacagtcca
actctggtcgtatacaaaaatgctctgtatgcgtcgtggattgaagcgagtaagcttcgc
gtcaagatgtataccggtggggagtgggcaagcgtcgacggaggcgcggaaggattaaac
aaggatccgaacaaagcggcggcttttcctgctttagccgtattgggaaatgatttaatc
gcggtatggtcggaacagtacgggagcatttaccagctcagggcgaagaagtacaacggt
acaagttggacgccgatcgacggaaacggcgtgaccggattaaatataaagaccgataaa
agcgcgtattccccgtcgttaatcgcggccgacggcgacttgtacgcagcttggaatgaa
ccggtcgatgcgacgaatgacgaccaaattcgggtgaagaaatacgacggaaacgtctgg
acaagcattgacggtaatgggaagaatggaatcaacgtagatccttctttccgagcctac
caggtgaaattagcagttgtaaatcatgaagtccatgcagtgtggtcggaaaactggggt
tgggttggttctaccgcggtattcaaaattcgcgcgaagaagtataacggttctgtttgg
acgagcgcagaagccggcttaaacggtttcgtcgcggattcttcgaaagcagcttttaat
cctgccataaccacactgaacaatgcgacattcgtagcgtggcaggagaagaacacttcg
gtcgaacagattcgggtaaactacatgccggctccggccgtcaatagcgtaacggtgacg
cccccgagtcccattagcctagcacaaggtggaagcaagcagcttcaagcatcggtagac
gcgcagggaggagcggcgacgacgctcacgtggacaagcagtgactcaagcagtaaagtg
gcggtagacggtactggtaatgtaaccgttgctgcggacgccgcgccgggcgattatacg
attacggcgacatctacgtttgataatagcaaaaaagcgacggtgacgattaaagtcttg
cttcctgccgttattagcgtgtcgttctcccagggcagtgctagtattcagcaaggtcta
tacaggcagatcggttttacagtaaacgtggtggaaggaacgccaaagactctcaattgg
acgagcagcgacgttagcaacaaagtggcggtgaacggtacgggtttagtgaccgttgcg
tcggacgcagtgccgggaagttatacgattacggcgacctcgacgtttgataatagtaaa
aaagcgacgatgacaataacggtcaccgcggcgcctgcagttaacagcgtaaccgtcact
ccagccacctacagcgtcgtgcagggcggaagcaaacagctcgcggttatggtggatgcc
gcgggaggagctacgacaaatgtaacgtggtcgagtagcgatgcaagcaataaggtagcg
gtgagcggcacgggtaacgtgacagtcgcagctaacgccgttccggatgattatacgatt
acggcaacatcgacgtttaacaatagcaaaaaagggacggcaacgattacggtcactgcg
gcgccggtagcggaggcgaggccagcggcgcagatagactacgcggcagagcaactgacg
ggactggtgccgaatggcgcatacaccattaaaggaacggcggttactgcggacagcaac
ggcaaactggagattgacggcagttggctgggcacaaccgtgaacgtggtgaagaagggc
aacggtacgacaacgatcgatagcctggcgcaggcgttgagcctgccggctcgcccggca
acgccaaccgcagggaagacggacgagacgtccatcaacggcaacgatgggacgttgact
aacgtaacttcggcaatggagtacaaaaaaggaacaagcggcagctgggcggacgtaacc
ggtacgagcgtgactgaattggagccggatacttactccgtgcgcttcaaagcgacgtct
tcggcatttgcttcgcaagcgcaactagtaacgatttcgacgtttggattatcgccggaa
gcgacgccagtggcggtgatcgattacgctggtgaacaattgacgggattggtaccgaat
gcctcctacaccattaagggcacagcggtgacggcgaacagcaacggggaagtgacaatc
gacgaaagttggcttggcacaaccgtgaacgtggttaagaagggcaacggcacgacatca
atcgatagtgtggcgcaggcgttgatcctgccggttcgcccggcgacgccaaccgcaggg
aaaacggacgagacgtccatcaacggcaacaatgggtcgttgacgaacgttacttcggca
atggagtacaaaaaaggaacgggcggcagttggcaggacttaaccggaacgagcttaaca
ggtctggagccggatacgtattacgtgcgcgccaaagcgacgtcttcggcattcgcgtct
gttgcgcagacggtaacgatcgcggcgtttaacgcgtctcatgagtcgacgccagtggcg
gtaatcgactacgctggtgaacaattgacgggactggtaccgaacgccccctacaccatc
aacggcactgacgtaacggcgaacagcgacggggaagtgacaatcgacgaaagttggctg
agaacaaccgtgaacgtggtgaagaagggcaacggcacgacaacgaccgatagtgcagca
cagacgataagcttgcctgctcgcccggcgacacctaccgcagggaagacggacgagacg
tcaattaacggcaacaacgggacgttgacgaacgtaacttcttcaatggaatacaagaaa
ggaacgggcggcagttggacggacgtaaccggaacaagcttaacaggtctggagccggat
acgtattacgtacgcgtcaaagcgacgtcttcggcatttgcttcggaatcgcagcaagta
acgatttcgacatatggatcattgccggaagcgacgccggcggcggggatcgactacgcg
gcggaacaattgacgggattggagccgaatgagacctacaccatcaacggcacgacagtg
acggcggacggtaacgggaaagtggcgatcaatggcagttggctgggcgcaaccgtgaac
gtggtgaagaagggcaacggcacgacaacgaccgacagcgcagagcagacgttaagcttg
ccggctcgcccggcagctccggtcgatattacagtgacggatgtcacttacaacggagcg
aatgatggttcgattctcaacttaaatcttacgatggagtataaaaagggaaataccgga
acatggacgaatacatccgggacatcggaagtcgggttggagccaggcgtctattatgtg
cgggtagccgcaacgcaaacggcgtttgcctccattcccgctcaagtcaccatccatgac
tcgggtgcaaccattcctgctgctccgaatgtgaatgccgacgatgcaagcaatgtgatt
gtcggcttggacacgacgatggaattctcagttgatggcggggcttacgtccgatataac
ggaaccaatatgccccagcttagcggcgagcacacggttctagtgcgggtggcagccagc
ggatctgttccggcgggcccgtctactacgctgatcttcacgacgaatgtttccgtccca
gctggcggtttgacggtaacggcaggagatccgagtggctcggcaaacgatggcaaaacc
cggataacggtaacgcctggtgttaacggcgaacatcggttggtctacttcaacttcggc
agcggcacagtaaaagtaccaaatgtcggcgacacgcttagcggttactcgaacgtaccg
agcgacctcctgatcccggcggcgaacggggacaagatcggcattgccgaggtagatgca
cagggccgagtcgtgaagtttggtcaaacggcagcgattgtgatcgtcgagcagtcgggg
cctcagcctacgaacggaacatcgaccgatacgaacgaagaggcagtcgacgtgctgatt
aatggcaaggttgaaaatgcgggtaaagcaacaacgacggaatcggtcggcatcaagacg
acgacagttgtcgtcgatccggctaagctaaaggcgaagttggaatcggagggcgtaaat
gcagtcgtcaccattccagtcaagtccgcgtcgaacgtcattgttggcgaactgaacggc
cagatggttaagaatatggagaatctgtcagcgacgctagttttgcagacaagcaaagga
acctacacgttgccggccaaggaaatcaacattgacgaagtagccggcaagttcggcagc
aacgtgaagctggatgacattcagttaaaaatctcgattgcgcaaacgtcggacacgatg
gcaaaggttgtcaagaacgcggaggcagagggcaagttctccgttgtcgtgcctgcgctt
gacttcacggtcacaggtacttacggcggaaaaacagtcgaagtcacgaaatttaacgtc
tatgtcgaacgtatggtggctttgccggaaggcattgacccgaacaagattacgactggc
gtcgttgttgagccggacggaacggttcgccacgtaccgactaagatcgtagtcatcgat
ggcaagcattatgctcagatcaacagcttaaccaatagcacttactccgtcgtctggcat
ccgctcgaattcctggatgtcgcgaaccactgggcgaaatccgctgttaatgacatggga
tcgcggatggtcattgacggtacgggcaacggtttgttcagtcctggccgcgatatcact
cgagctgagtttgcagccattcttgtacgaggactgggactgaaactggaaaatagttca
acggtgttctctgacgtgaagacttcgaattggttcagcagcgcgatcaacacggcatat
tcgtataaactgattgaagggtttgagaatggcacgttccgaccgaacgacaagattact
cgagaacaggccatgatgattctctccagagcaatggcgattactggattgaaggcaaag
ctgtccactcaatcggatgatacaacacttcgttcttttagagatgagttaaacgtatcc
ggctgggcacacagcagtgttatagacagcgtacaggccggccttgtatctggacgaagt
gccaccgagcttgcaccaaaggcattcatcacgagggctgaggttgcaactattattcaa
agacttttgcaaacatcaggcttgatttaa
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