Cohnella abietis: KCTCHS21_51430
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Entry
KCTCHS21_51430 CDS
T05979
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cohn
Cohnella abietis
Pathway
cohn00470
D-Amino acid metabolism
cohn00550
Peptidoglycan biosynthesis
cohn01100
Metabolic pathways
cohn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KCTCHS21_51430 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KCTCHS21_51430 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KCTCHS21_51430 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cohn01011
]
KCTCHS21_51430 (ddl)
Enzymes [BR:
cohn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KCTCHS21_51430 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cohn01011
]
Precursor biosynthesis
Amino acid ligase
KCTCHS21_51430 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
GARS_A
RimK
ATP-grasp_3
Ig_GP210_15th
Motif
Other DBs
NCBI-ProteinID:
BBI35744
UniProt:
A0A3T1DCI2
LinkDB
All DBs
Position
complement(5796612..5797763)
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AA seq
383 aa
AA seq
DB search
MGKIRVGLVYGGRSGEHEVSLQTALAVLKEFDYDRYELIPFYITPKGQWRSGPLLNAPPA
AVAQLQFTPAASADADEGQHSGEVSAVKPLLPVLKGMSESVLTDGSSDSDGKPIDVMLPL
LHGTFGEDGTIQGLFEMAGLPYVGAGVLASSVGMDKVAMKTMFAHAGLPQVGYRHFIRFE
WKQDREKCLESVEELGYPCFVKPANLGSSVGVSKARNRDELVAAIEEALRYDRKVIVEEF
VDAREIEVSVLGNDDPRASVPGEVCSSNEFYDYKAKYIDGKSAMVIPAEISPEVAEAVRV
MAVQAFRSIDGSGLCRADFFLRRSDGALFINEVNTLPGFTPYSMYPLMWKESGVSYRELL
DTLIQLAIERHEERQSIDYGGGE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatacgtgtcggactcgtttacggaggacgttcaggtgagcacgaggtttcg
ctgcaaacggcattggccgtattgaaggagtttgactacgatcgatatgaacttattcct
ttctatattacacctaagggtcagtggaggtcaggtcctttgttgaacgctccgccggcg
gcggttgcacaattacaatttactcctgctgcaagtgcagatgcagatgagggtcagcat
agtggagaagtcagtgccgttaagccgttgctgccagtactaaagggaatgtcggaatcg
gtgctgacagatggctcatcggacagcgatggtaagcctattgatgttatgctacctttg
cttcatggcacctttggtgaagacggaaccattcaaggcttgtttgagatggccgggctt
ccgtacgttggagcaggtgtgctcgcttcttctgttggaatggacaaggttgcaatgaag
actatgtttgcccatgcaggcttgccgcaggtagggtatcgtcattttatccgatttgaa
tggaagcaggatcgtgagaaatgtctggagagcgtcgaggagttaggttatccgtgcttt
gtgaagcctgcgaatttgggttctagcgtaggggtgtcgaaagcgcgtaatcgtgatgag
ctcgttgctgcgatagaggaagctttgcgatatgatcggaaggttatcgttgaggagttt
gttgatgcgcgcgagattgaagtaagtgtgcttggtaatgatgatccacgtgcttccgtg
cctggggaagtttgtagctctaatgaattttatgattataaagccaaatatattgacggc
aaatcggctatggttattccggccgagatttcgcctgaagttgcggaagcagtgcgagta
atggctgtgcaagcattccgatcaattgatggatcggggctatgtcgtgcggatttcttc
cttcggcgcagcgatggtgcgttgttcattaatgaagtaaacacgctgccaggcttcaca
ccctatagcatgtacccgctaatgtggaaggaatccggagtctcgtaccgcgaactgctg
gacaccctcatccaattagcgatcgagcgccacgaggaacgccagtcaatcgactacggc
ggcggagaatag
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