Cohnella abietis: KCTCHS21_54870
Help
Entry
KCTCHS21_54870 CDS
T05979
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohn
Cohnella abietis
Pathway
cohn03420
Nucleotide excision repair
cohn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTCHS21_54870
03430 Mismatch repair
KCTCHS21_54870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_54870
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_54870
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTCHS21_54870
MMR (mismatch excision repair)
Other MMR factors
KCTCHS21_54870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_14
ResIII
MSSS
Motif
Other DBs
NCBI-ProteinID:
BBI36088
UniProt:
A0A3T1DDN5
LinkDB
All DBs
Position
complement(6198749..6201100)
Genome browser
AA seq
783 aa
AA seq
DB search
MFFERDNTSSIDIDASINKLNPKQKEAAIATNGPLLIMAGAGSGKTRVLTHRIAYLISKR
LAAPWSILAITFTNKAAREMQDRVAKLIGPSGKDIWVSTFHSMCVRILRRDIERIGFGSN
FSILDSTDQLSVIRNVMKDNNIDTKKIEPKAVQGSISAAKNELMSPAQYEQKQGDYFESI
VAKVYTQYQRRLKANNSLDFDDLLLQTIQLFKDVPEVLESYQNKFKYIHVDEYQDTNKAQ
YTLCKMLAQKHHNICVVGDSDQSIYRWRGADITNILNFEADYPEAQSILLEQNYRSTSNI
LDAANAVIKNNMGRKAKNLWTDQDGGDKITVYQGDSEHEEGYFIAGEIRKNRQNARRYGD
HAILYRTNAQSRVVEEILIKSEIPYQIVGGIKFYDRKEIKDILSYLRLVSNPDDDNSLNR
VVNEPKRGLGDTTMTKVREEATRKGISILQLLNEGDGLLGDGLYHLDIQSRAKVALSGFR
DLINNLSAMVEYLSVTELTEKLLELTEYRLELQRENTLESKSRLENIEEFLSVTQEFEKR
NDDKSLISFLTELALVADIDSMDDEEGDGDAVILMTMHSAKGLEFPVVFIVGMEEGLFPS
SRSFMDNAEMEEERRLAYVGITRAEKKLYLTCARMRLLYGKTSTNAPSRFLGEIPLELKE
AVESAGGGRSGSYGGYGSRVSGGGNSGYGTRSPSSPSVGFGARPTVSPTTNASVTRPQTP
SAAKPVGDGMAIAAGDKVQHAKWGIGTVVAVKGTGNDAELQIAFPAPTGVKRLLAAFAPV
TKI
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgaacgggataatacaagttccattgatatcgatgcctcaattaataagctg
aatccaaagcagaaggaagcggccatagcgactaacggacccctccttattatggctggc
gcaggaagcggtaagacgcgagtgctgactcatcgtatagcttatctcatttccaaacgt
ctagctgcaccatggagtattttggcgattacttttacaaacaaagcagctcgtgaaatg
caggacagggtagctaagctcattggtccgtccggcaaagatatttgggtaagcaccttc
cactccatgtgcgtgcgtattctccgtagagatatcgaacgtattggattcggttctaat
ttcagcattctcgattccacggatcagctttctgtcatccgtaacgtcatgaaggataac
aacatcgatacgaagaaaatcgagcctaaggcagttcaaggctccattagtgcggcgaag
aatgagctcatgtctccggctcaatacgagcagaagcaaggggattattttgaatccatc
gtagctaaggtgtacacgcaatatcaacggagactcaaagctaacaactcgctcgacttc
gatgatcttttgctccaaacgatccagctttttaaagatgttcctgaggttctagaatct
tatcagaataaattcaaatacattcatgtcgatgaataccaggataccaataaagcgcaa
tacaccctgtgtaaaatgctcgcacaaaagcatcataacatctgcgttgttggagatagt
gatcagtcgatttaccgttggcgtggagcggacattacgaacatccttaactttgaggcg
gattatcctgaagcgcaaagtattttgctggagcagaactatcgttctacctcgaacatt
ctagatgcggcgaacgcagtcattaagaacaatatgggtcgcaaagcgaaaaacctatgg
acagatcaagatggcggcgacaaaatcacggtgtaccagggtgattccgagcacgaggaa
ggttattttatagcaggtgagattcgcaaaaaccgtcaaaatgcccgtcgctacggtgat
catgcgattctgtaccggacgaatgcgcagtcacgggtcgtcgaggaaatccttattaaa
tctgaaattccttaccaaatcgttggcggaattaagttctacgatcgtaaagagattaag
gacattctttcctatttacggttggtgtccaatccggatgatgataatagcttgaatcgg
gtcgttaatgagccgaagcggggcttaggcgatacgacgatgacgaaggtgcgggaagag
gcgactcgtaagggtatctctattttgcagctgcttaatgaaggggatgggttgctcgga
gacgggctgtatcatctggatattcaatctagagcaaaggtagctttgtctggcttccgt
gatcttattaataatttatctgcgatggtcgaatatttatccgtaacggaattgacggag
aagctgctcgagctcactgaatatcggcttgagctgcagcgggagaatacacttgaatcc
aagtcacgtcttgaaaatatagaagagttcttgtcggttacgcaagaattcgagaagcgc
aatgatgataagtcactgatctcatttttgacagagctggcacttgttgcggatattgat
tcgatggatgatgaagaaggtgacggtgatgccgtaatcctgatgaccatgcatagcgcc
aaaggcttggaattcccagtcgtgttcattgtagggatggaagaaggcttgttcccaagc
agtcgttccttcatggataacgcggaaatggaagaagaacgaagattggcatacgttgga
atcacaagggcagagaagaagctatatttaacctgtgcccggatgcggttgctctatggt
aaaacaagtacaaatgctccttcacggtttttgggagaaattccacttgaattgaaggaa
gcggtagaatctgcaggtggaggccgctctggctcgtatggaggatatggttctcgggta
agtggtggaggaaacagtgggtacggcacacgttccccatcatctccaagtgtaggattc
ggtgctcgccctaccgttagtccaacgacaaacgcttcagttacccgaccgcagacacct
tcagctgctaagcctgttggagatggaatggcaatagctgcaggagataaggttcagcat
gcgaagtggggtattggtactgttgtagctgtaaaaggtacaggtaatgatgcagagctg
caaattgcgtttccagcacctacaggtgttaagagactattagctgcgttcgctccagtt
actaaaatataa
DBGET
integrated database retrieval system
