Cohnella abietis: KCTCHS21_60220
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Entry
KCTCHS21_60220 CDS
T05979
Name
(GenBank) hypothetical protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cohn
Cohnella abietis
Pathway
cohn02010
ABC transporters
cohn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KCTCHS21_60220
03070 Bacterial secretion system
KCTCHS21_60220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cohn02000
]
KCTCHS21_60220
02044 Secretion system [BR:
cohn02044
]
KCTCHS21_60220
Transporters [BR:
cohn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KCTCHS21_60220
Secretion system [BR:
cohn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KCTCHS21_60220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
cNMP_binding
Peptidase_C39
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_16
Zeta_toxin
AAA_22
DUF3335
DUF87
AAA_30
AAA_15
Peptidase_C39_2
MMR_HSR1
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBI36623
UniProt:
A0A3T1DEV2
LinkDB
All DBs
Position
complement(6832717..6835785)
Genome browser
AA seq
1022 aa
AA seq
DB search
MRDLHHIVLDTIPIFQVLSPQEKEELFASFERLSFHMGDTIIEAGERAESFHLILAGKVR
MIGKDEDGKELNFGLIEEGSHFGQEALLNEQFQEHALRASAKLELLRLSRTMFMRMIDAH
PELRVYLLEQLADDAMRTFLKRTALFAPLHHQELRSLLDIMAMKEYAPGQAIVSEGETGD
AFYILRSGTASVRKDSEGGRKLNTIKPGEFFGELALLTGDPRKASVIADDAVSVFSLAKS
DFDKLIIKYPKVRETIIGIASAYLQSAETTLNAVASVNAKDSEVNAAEIFAEEAEQEKQQ
RYGARRTWRLKNRFPVRIQQSEMDCGPTCLTMIAEHYGKRLSIHRLRELAQVGLEGSTLF
NLCKTAESIGFQADAVRSSLKGLAEHTLPAIAHWKGNHYVVVVKVDERFVTVADPAVGLL
TYSHDDFLKGWTLNTVFLKPVEAFFTQEESKPSFKRYWAFFASHKRALIHLLWLTLLLQV
INLALPLFTQQVIDRVLVGKNYDQLSIMLIIMLGVSLLTMLVQSIREWVIAGTFIKIDID
MIMSFYRHVFRLPMRYFATRKVGDILTRAGENQVIRQFLVTNSMNAVLNVMTIVVYMVIM
FSYSVTLAWIALAFIPCFIALTLIVTPLMKRNSRKQFQADVELQNVLVEAIGSMRTVKAL
AAEDEVRKKVEGRFRQSTFVQMKGWKIDIFSGSVATVLQTLSGITVLYAGAVFIIGDKMT
VGELMAFSAVFALVTNAALGLIGMWDEFQGVRIALERLDDVFETEVEEADLNRLTALPKL
TGAITFERVSFRYNSDGKNILQNITFDMAPGQTTAIVGRSGSGKSTLANLLLKLYAPSSG
VVRIDGHDLKQVQAETLRKQIGVVQQEAGLFSGTIHENIAYQIPDASMDEVMAAAMLAGA
HEFIMTFPNGYDTQVGEKGASLSGGQRQRITIARALIGNPRILIFDEATSALDNESEKII
QRNMATILKDRTTLIIAHRLSTIRNADRILVLDQGVIAESGTHEQLMMDKGLYHMLVSQP
LE
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatttacatcatatcgttttggataccatccctatttttcaggtgctgtcgcca
caggagaaagaggagctatttgcctcctttgagaggctttctttccatatgggagacacg
attattgaagctggagaaagagcagagtcgtttcatctcatcttggcgggcaaagtacga
atgattggtaaggatgaggatggcaaagagcttaatttcggattaatagaagagggctcg
catttcggacaggaagcgctgttgaatgaacaatttcaggagcatgcgctgagggcttcg
gcgaagcttgagcttctaaggttatccaggacaatgtttatgcgaatgattgacgcgcac
cctgaattgagggtgtacttacttgaacaattggctgatgatgcgatgcgtacatttctg
aagcggacggcgctgtttgctccgctacatcatcaggagctgcgctcgctgcttgatatt
atggctatgaaggaatatgcacccgggcaagcgattgtcagtgaaggggagacgggagat
gcgttctatatccttcgttccggtacggcttccgtaaggaaggatagcgaaggaggtcgc
aagcttaatacgataaagcctggggagtttttcggagaacttgcgctgttgaccggagat
cctcgtaaggccagcgttatagcggacgatgcggtttccgtgtttagtctggcgaagagc
gactttgataagttgattattaagtatccaaaggttagggaaacaattatcggtattgct
tctgcttatttacagagtgcagaaacaactctaaatgcggtagcgagcgttaacgcgaag
gatagcgaagttaatgctgccgaaatttttgcagaagaagcggaacaggagaagcagcag
cggtacggcgcgcgaaggacttggcgattaaagaaccggttcccggtgcgcattcagcaa
agtgagatggactgtggcccaacctgcctcacgatgatcgctgagcattacggcaagcgt
ttgagcattcatcggctcagggagctagcgcaagtcgggttggagggaagcacgttattt
aatctgtgcaaaacagccgaatcgatcggctttcaagcggacgcggtccgcagcagcttg
aagggactcgccgagcatacgctaccggctatcgcccattggaaaggcaatcattatgtc
gtggttgttaaagtagacgaacgattcgtgaccgtggccgatccggctgtggggttattg
acttattcgcatgacgattttctaaaaggatggacactgaatacggtgtttctgaagcct
gtcgaagctttcttcactcaagaagagtcgaaaccttcattcaagcgctactgggctttt
ttcgcctcccacaagagagcgctgatccatctcttatggttgaccttgctattgcaggtc
attaacctggcgctccccctgtttacacagcaggtgatcgatcgcgtgcttgtcggcaag
aactatgatcaactgagcattatgctgatcattatgctaggggtctcgttgcttaccatg
ctcgttcaatcaatcagggaatgggtcatagcggggacattcattaaaattgacatcgac
atgatcatgagtttttatcggcatgtatttcgcttacccatgcgttatttcgctacccgg
aaagtgggagacattttgacgcgcgctggggagaatcaggtcatccggcaatttcttgtc
acgaacagtatgaatgctgtattgaacgtgatgacgatcgtcgtatacatggtcattatg
tttagctatagcgttacgttggcttggatcgccttggcgtttattccctgtttcattgct
cttacgctgatcgtgactcctcttatgaagcgtaacagcaggaagcaattccaagccgat
gtcgaactgcagaacgtattagtggaagccataggctccatgcgcactgtgaaagctctc
gcagccgaggacgaggtaaggaagaaggtggaggggaggttccgtcaatctacttttgta
caaatgaagggttggaaaatcgacatcttctccggttctgtcgccacagtgctacaaacc
ttaagcggtataaccgtactgtatgcaggggctgtatttattattggggataagatgacc
gtcggggagctgatggcttttagtgcggtgtttgcactcgttaccaatgcggcgttaggt
ctaatcggaatgtgggatgagtttcaaggcgtacggattgccttggagcggcttgacgat
gtcttcgagacggaggttgaggaagccgatctgaaccggctgacagcgctgccgaagctt
acgggggcaattacttttgaacgcgtatcgttccgctataattctgacgggaagaatata
ttgcagaacattaccttcgacatggctccaggtcaaacgactgctattgttgggcgaagc
gggtcagggaaatcgacattggcgaatttactccttaagctatatgcgccaagcagcggc
gtggtccggattgatgggcatgatctgaagcaggtgcaggcagagacgcttcgtaagcag
attggagttgtccagcaggaagcggggctttttagcggaacgattcatgaaaatattgct
tatcaaattcccgatgcttcgatggatgaggtaatggcggccgccatgcttgcaggagcg
cacgaattcattatgacattcccgaatgggtacgacacacaggttggggagaagggcgca
agcctatccggtgggcagcgccagcgtattaccattgcacgggcattgattggcaatcca
cgtattctgatattcgacgaagcgacgagtgcattagacaatgaatccgagaaaataata
caacggaatatggctacgatacttaaagatcgaacaaccctcatcattgcacatagacta
agtacgattaggaatgcggaccgcattctcgtactggatcagggagttatcgcagagtct
ggtactcatgagcagctaatgatggataaaggtctttatcacatgctggttagccagccg
ttagaataa
DBGET
integrated database retrieval system
