Corynebacterium pseudotuberculosis CIP 52.97: CPCIP5297_01270
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Entry
CPCIP5297_01270 CDS
T02054
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
coi
Corynebacterium pseudotuberculosis CIP 52.97
Pathway
coi00521
Streptomycin biosynthesis
coi00523
Polyketide sugar unit biosynthesis
coi00525
Acarbose and validamycin biosynthesis
coi00541
Biosynthesis of various nucleotide sugars
coi01100
Metabolic pathways
coi01110
Biosynthesis of secondary metabolites
coi01250
Biosynthesis of nucleotide sugars
Module
coi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
coi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CPCIP5297_01270 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CPCIP5297_01270 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CPCIP5297_01270 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CPCIP5297_01270 (rfbB)
00525 Acarbose and validamycin biosynthesis
CPCIP5297_01270 (rfbB)
Enzymes [BR:
coi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CPCIP5297_01270 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AEQ05800
LinkDB
All DBs
Position
complement(258156..259160)
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AA seq
334 aa
AA seq
DB search
MRKNLLVTGGAGFIGSNFVRRTLETRSDYRVRVLDKLTYAGNSANLDGCDAELVEGDICD
AALVDKLLSDADVVVHFAAESHNDNSLEDPSPFIHTNVVGTFTLLEAARRHRVHLHHVST
DEVFGDLELEDPNRFTERTPYNPSSPYSASKAGSDHLVRAWVRSFDVSATLSHCSNNYGP
YQHIEKFIPRQITNILSGIPPKLYGTGEQVRDWIHVDDHNDAIHAILDRGRIGESYIIGA
DNDHVNNKQVIELICHLMGADSYEHVADRPGHDMRYAMDSTKLRTELGWKPRFTDTATGM
REGLSHTIQWYRDNEHWWRPLKDTVENNYAKRGQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaagaatttgcttgttaccggcggcgccggctttatcggttctaattttgtccgc
cgtactctagaaacccgcagcgattatcgcgtgagggtattagacaagctgacgtatgca
ggaaatagcgctaacctcgatggctgcgacgctgagctggtcgaaggcgatatttgcgat
gctgcgctcgtcgataagcttttgagcgatgcggacgtggtagtgcattttgctgcagag
tctcacaatgataactccctggaagatccttctccgtttattcataccaacgtagtgggc
acgttcacgctgctggaagctgctcgacgccaccgtgtgcatcttcatcacgtttctacg
gatgaggtcttcggcgatctcgagcttgaagaccctaaccggttcacagagcgcacccct
tacaatccttcctccccttattcagcgtccaaggcgggttctgatcatttggttcgagca
tgggtgaggtcttttgatgtctcggctactttgtctcattgctcgaacaattatggtcct
taccagcacattgagaagtttatcccccggcagatcaccaatatcttaagcgggattcca
cccaagctctatggcacgggtgaacaagtgcgagactggatccatgtagacgatcacaac
gatgctatccatgcgattcttgatcgtggtcgcatcggtgagtcctatatcatcggtgcc
gacaacgaccacgtgaataataaacaagtcatcgagttgatctgccatctcatgggggca
gattcttatgagcacgtcgccgataggccaggtcatgacatgcgttacgctatggattcc
accaagctacgcacagagctgggttggaagcctcgattcacagacactgccaccggcatg
cgcgagggtttgagtcatactattcagtggtatcgcgacaacgagcactggtggcgtcct
ctcaaagacaccgtggaaaacaactatgccaagcggggtcagtga
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