| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
coi Corynebacterium pseudotuberculosis CIP 52.97
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:coi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPCIP5297_01720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:coi03021]
CPCIP5297_01720
03400 DNA repair and recombination proteins [BR:coi03400]
CPCIP5297_01720
Enzymes [BR:coi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPCIP5297_01720
Transcription machinery [BR:coi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPCIP5297_01720
DNA repair and recombination proteins [BR:coi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPCIP5297_01720
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
350307..353789
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| AA seq |
1160 aa
MAVSRQTKSVADIPGAPERFSFAKITEPIEVPGLLDIQLDSFAWLIGTPEWRARQQEELG
ESVRITSGLEEILEELSPIQDYSGNMSLSLSEPRFEDMKNTIDECKDKDINYSAPLYVTA
EFINNETQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEI
MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNAFFRAKRYDLAKVGRYKVN
RKLGLGGDNEGLMTLTEQDIATTLEYLVRLHAGESTMVAPNGDVIPVDTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNSFGFIETPYRKVENGVLTDQIDYLTADEEDRFVVGQAHVEVDAQGKITADS
VTVRVKNGDIQVVAPESVDYLDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPFVGTGMERRAAYDAGDLIINKKAGAVENVSADFITVMADDGTRETYMLRKFERT
NQGTCYNQIPLVNLGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLKDLDERGIVRIGADVRD
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAAAGWKIDPEDPANAELLKTLPEDLYDVPAGSLTATPVF
DGATNEEVAGLLANSRPNRDGDVMVDANGKAQLFDGRSGEPFPYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDDEFDQ
AGASLGINLSRDERSDADIA |
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| NT seq |
3483 nt +upstreamnt +downstreamnt
ttggcagtctcccgccagaccaagtcagtggccgacatccccggggctcccgaacgtttt
tcgttcgccaaaattacggaacctattgaggtcccgggacttcttgatattcagctagat
tccttcgcatggctcattggtacgcccgagtggcgtgctcgtcagcaggaggagctaggt
gaaagcgtccgcataaccagcggactggaagaaatcttggaggagctatctccgattcag
gattattccggaaacatgtcattgtctctctcggagccccgcttcgaggacatgaagaac
actatcgatgagtgtaaagacaaagacattaactattctgcgccgctttatgtgactgca
gaatttatcaataatgaaactcaggagatcaagtcccagactgtcttcatcggcgatttc
ccgatgatgaccgacaagggaaccttcatcgttaacggcactgagcgtgtcgtggtctcc
cagcttgttcgttcgcctggcgtttacttcgaccagacgattgataagtccaccgagcgt
ccgctgcactctgtgaaggtgatcccttctcgcggtgcgtggttggaatttgacgtggat
aagcgcgacaccgttggtgtccgtattgaccgcaaacgtcgccagccggtgaccgttctg
ctcaaggctcttggttggaccactgagcagatcacggagcgctttggtttctccgaaatt
atgatgtccacgcttgagtcggacggtgtggctaacaccgatgaggctctgctggagatc
taccgcaaacagcgtccgggtgagcagccgactcgtgacctcgcgcagtcgctgctggat
aacgccttcttccgcgcgaagcgttacgaccttgccaaggttggacgctacaaagtgaac
cgcaaactcggtctcggtggggacaacgagggtctgatgactctcactgagcaggacatc
gcaaccactctcgagtacctcgtgcgtctccacgctggtgagagcactatggttgcaccc
aatggtgatgttatccctgtggatacggatgacattgaccactttggtaaccgtcgtctc
cgtacagtcggagaactgattcagaaccaagtccgcgtgggtctgtcccgcatggagcgc
gtggttcgtgagcgcatgactacccaggacgcagagtctattactcctacctccttgatc
aacgtgcgcccggtttctgctgccatccgcgagttctttggtacctcccagctctcgcag
ttcatggatcagaacaactccttgtctggcctcacacacaagcgccgtctctctgctctg
ggcccaggcggcctgtcgcgtgagcgcgctggcattgaggttcgagacgttcacgcttct
cactatggtcgtatgtgcccgattgagactcccgaaggtccgaacattggtttgatcggt
tccttggcttcctatgctcgggtaaactctttcggcttcatcgagaccccctaccgcaag
gtggaaaacggtgttctcaccgatcagatcgattacctcaccgcagatgaggaagatcgt
tttgtggttggtcaggctcacgtcgaggtagacgcacagggcaagatcaccgcagatagc
gttactgttcgtgtgaaaaatggtgacatccaggtcgtggcaccggaaagcgttgattac
ctagacgtttccccacgccagatggtctctgtggctaccgccatgattccgttccttgag
cacgacgacgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggctgtgccgctg
gttcgttcagaagccccgtttgtgggaactggcatggagcgtcgtgctgcttatgacgcc
ggcgacctcattatcaacaaaaaggctggcgctgtagagaacgtctccgctgatttcatc
accgtgatggctgatgacggcacccgtgagacctacatgctgcgcaagtttgagcgcacc
aaccagggcacctgctataaccagatcccattggtgaacttgggcgaccgcgttgaggcc
ggacaggttctcgcagatggccccggtactcacaacggtgagatgtcgctcggccgcaac
cttcttgttgcgttcatgccatgggaaggccacaactacgaggacgctatcatcctcaac
cagcgtgttgtggaagaggacattcttacttcgatccacatcgaggaacacgagattgat
gcccgagacaccaaacttggtgcggaggagatcactcgtgagattcccaatgtgtccgag
gatgtgctcaaggatctcgatgagcgcggcattgttcgcatcggtgctgatgtccgcgac
ggcgatatcttggtgggtaaggtcactcctaagggtgagaccgagctgacccctgaagag
cgcctgctgcgtgcaatctttggtgagaaggcacgtgaggttcgcgatacctctatgaag
gtgcctcacggcgagaccggtaaggtcatcggcgttcgtcgtttctcccgtgaagacgat
gatgatctcgcgcctggcgttaatgagatgattcgtgtctatgttgcccagaagcgcaag
atccaggacggcgataagcttgctggtcgccacggtaacaagggtgtcgttggcaagatc
cttccgcaggaagacatgccattcatgcccgacggtaccccggttgacatcatcctgaac
acgcacggtgtgcctcgtcgtatgaacatcggccaggtgctggaagtccaccttggttgg
ttggctgctgccggttggaagatcgaccccgaggaccccgctaacgccgagctgcttaag
acgcttcctgaggatctgtacgacgttcctgctggttcgcttaccgcaacaccagtgttc
gacggtgctaccaacgaggaagttgcaggcctcctagccaattctcgtccaaaccgcgac
ggcgatgtcatggtggatgcaaacggcaaggcacagcttttcgacggtcgttccggcgag
cctttcccatacccagtgtctgtcggctacatgtacatgctgaagctgcaccacttggtt
gatgagaagatccacgcacgttctaccggcccttactccatgattactcagcagccgttg
ggtggtaaggctcagttcggtggacagcgcttcggcgaaatggaggtgtgggcaatgcag
gcttatggcgctgcctacacgcttcaggagcttctgaccatcaagtctgatgacgtagtc
ggacgtgtgaaggtctacgaggcaatcgttaagggcgagaacattccagatccgggtatc
cctgagtccttcaaggtgctcctcaaggagcttcaatcgctgtgcttgaacgtggaagtt
ctttctgcagacggcactccgatggagctgtccggttcggatgacgacgagttcgaccag
gccggtgcctcactgggcatcaacctgtctcgcgacgagcgttccgacgccgacatcgcc
taa |
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