Corynebacterium pseudotuberculosis CIP 52.97: CPCIP5297_03375
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Entry
CPCIP5297_03375 CDS
T02054
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coi
Corynebacterium pseudotuberculosis CIP 52.97
Pathway
coi03420
Nucleotide excision repair
coi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPCIP5297_03375 (pcrA)
03430 Mismatch repair
CPCIP5297_03375 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coi03400
]
CPCIP5297_03375 (pcrA)
Enzymes [BR:
coi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPCIP5297_03375 (pcrA)
DNA repair and recombination proteins [BR:
coi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPCIP5297_03375 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPCIP5297_03375 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DEAD
IRF-2BP1_2_M
ResIII
OstA_2
Motif
Other DBs
NCBI-ProteinID:
AEQ06199
LinkDB
All DBs
Position
705007..707547
Genome browser
AA seq
846 aa
AA seq
DB search
MNNSDDFPTQQGFDFGDWATAKKTPAEPSPFSSHTYRQEEHRTWTTAKDQQPASTPAPAD
DLVQGLNPQQQQAVEHSGSPLLIVAGAGSGKTAVLTRRIAYLMRIRGVQPGQILAITFTN
KAAAEMRERVAHLVGPIASRMWVSTFHSTCVRILREQAQLVAGLNSNFTIYDSDDSKRLL
AMISKDMNLDIKKFTPRLLGAGISNLKNELISPATAVAEAESTKNPYETTVAAVYVEYQR
RLRQANAVDFDDLIGETVRIFKEHPQVTEYYRRRFRHVLIDEYQDTNHAQYVLIHELVGT
GETASELCVVGDSDQSIYAFRGATIRNIEEFERDYPNATTVLLEQNYRSTQTILNAANSV
ISQNENRRKKKLWTALGSGDPITGYVADNEHDEARFIAQEIDALADKGIGYSDMAIMYRT
NNSSRAVEDVFMRSGIPYKVVGGTRFYERKEIRDVIAYLRLLDNPEDTVSLRRIINTPRR
GIGDKAVAFLTLHSENQGVSLQQALIDASEGQVSLLGARGRNAISGFVNMMSGLRDSAAE
SVNEITGMPDIGNVIAQILDITGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQ
VAYAKMDGSELDDLAAVGEPEPGSLQAFLERVSLVADADQIPDNEQGLVTLMTLHTAKGL
EFPVVFLMGWEDGQFPHLRALGDPKELAEERRLAYVGITRARKALYITRAMLRSSWGNPV
TNPASRFLTEIPQELLDWRREEPESSFDAWGQPSWGRNTGFSSARGDSWGSPRYGASPKP
KKTMPSYAKNSDLSLVVGDRVNHDKYGLGTVTKVDKGSPADSVTIDFGSSGTVRLMLIGS
VPMEKL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctgacgattttccaacccaacaaggttttgactttggcgattgggctacc
gccaaaaagacgccagctgaaccatctccgtttagctctcatacctacagacaagaagag
cacaggacctggactacagcaaaggaccagcagcctgctagcacgcctgcaccggctgat
gacttggtccaggggcttaatccgcaacaacagcaagcagtagaacacagtggctccccg
ttacttattgtggccggcgcaggttcaggcaagacagcagtacttacgcgccgtatcgct
tacctcatgcgcatacgaggcgtgcagccagggcagattttagctatcacatttaccaat
aaggctgcggctgaaatgcgagagcgcgtggctcatctcgtggggccgatcgccagcaga
atgtgggtgtctaccttccactccacgtgcgtacgcatcttgcgggaacaggctcagctg
gttgctggattaaacagcaatttcaccatctatgactcagatgattcaaagcgattactc
gcgatgatctctaaagatatgaacttagatatcaaaaagttcacgccgcgtttattgggg
gcgggaatctctaacctcaaaaatgagttgatttctcccgccacggcagtcgcagaagcc
gaaagtactaaaaatccatatgagacgacggtagctgccgtatacgttgagtatcagcga
cgcttaagacaagctaacgcggtcgattttgatgacctcatcggagagacagtacgtata
ttcaaagagcacccccaagtaaccgaatattacaggcgcagattccgccatgtgcttatc
gacgaataccaggacaccaaccacgcacaatatgtccttattcatgaactggtagggact
ggggaaaccgctagtgaattatgcgttgtcggagattcagatcagtccatttatgccttc
cggggcgcaactatacgcaacattgaggaatttgagagggactatcccaacgccacgacc
gttctcttggagcagaactaccggtcgacacaaacgatccttaacgcggctaactctgtg
atctcccaaaacgagaaccgacgaaaaaagaaattgtggacggcgctaggtagcggggat
ccaatcacagggtatgtcgcagataatgagcatgatgaggcccgttttattgcccaagaa
atagatgcgctcgcagataaaggcattggttacagcgatatggccattatgtatcgcaca
aataactcatcgcgtgccgtggaagacgtgttcatgcgttctggtattccctataaggtt
gtggggggaacccgattctatgagcgcaaagagatccgggacgttattgcttatctacgt
ttactggataaccccgaagatacggtttctctccgcaggattattaacacgccgcgccgg
gggatcggcgataaagccgtagcgtttctcaccctacattcagagaatcaaggagtgagt
ctccaacaagcgcttatcgacgcctccgaggggcaggtgagtcttctaggggcgcgcgga
cgcaacgcgatttcgggctttgtgaacatgatgtctgggctgagggatagcgcagccgaa
tccgtcaacgagatcaccggtatgccagatatcggcaatgttattgctcaaatacttgat
atcacgggatataaggcagagctggaaaaaagtaacgatccacaagatggtgcacgatta
gacaaccttaacgagcttgtctcggttgcccgagagttttcctcagaggcggccaaccag
gtggcgtatgccaagatggacggcagcgaactcgatgatttagctgctgtgggagaacca
gaaccgggtagtttgcaggcttttctggagagggtttcccttgtagctgatgccgaccaa
atccctgataatgagcagggcttggtcactcttatgactttgcatacagccaaaggacta
gagttcccggttgtcttcctgatggggtgggaagacggacaatttcctcacctgcgcgcg
ctgggagatcccaaagaacttgcggaggaacgacggcttgcgtatgtcggaataacgcgc
gcgcgcaaggccctttatataacccgagctatgttgaggtcctcctggggaaatcccgta
actaacccggcatcaaggtttcttacagagattcctcaagagcttcttgattggcggcga
gaggaaccagaaagttctttcgatgcgtgggggcagccttcctggggcagaaacacaggc
tttagctccgcgcgcggcgattcgtggggatcaccgcgttatggtgccagcccgaaaccc
aagaaaacgatgccaagctatgcaaagaacagcgatctttctttggtagtcggagatcgg
gttaatcatgataaatatggccttggtaccgtgaccaaggtggacaaaggcagtccggcg
gattccgtaactattgattttggttcctctggaacagtacggcttatgctgatcggctca
gttccaatggaaaagctttag
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