Corynebacterium pseudotuberculosis CIP 52.97: CPCIP5297_06280
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Entry
CPCIP5297_06280 CDS
T02054
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
coi
Corynebacterium pseudotuberculosis CIP 52.97
Brite
KEGG Orthology (KO) [BR:
coi00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPCIP5297_06280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coi03021
]
CPCIP5297_06280
Transcription machinery [BR:
coi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPCIP5297_06280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEQ06762
LinkDB
All DBs
Position
1344477..1346078
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AA seq
533 aa
AA seq
DB search
MAATDNSESSATARANGTSLSGGSASEAAVPAVKKTAKKVAAKKTARKVARKAAPRKAEP
VSTTVGPVGGIEAESSTASSIEPDSVELKDSAPVKKAAKKTAKKVAKKAVKKAAKKTAKK
AAKKAPQRASKVKEPVEISPELEVTDEDDLEADDADDYDPLSDAEDDLHDEEDDLVSVLD
DDDEEDTSEESEEDEEDEGSSVWDEDESAALRQARKDAELTASADSVRAYLKQIGKVALL
NAEQEVSLAKRIEAGLYATYRMEQMEEAFNNGDKEAKLTPAVKRDLRAIARDGRKAKNHL
LEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI
TRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLEIQQ
YAREPISLDQTIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDVLHTLSEREAGVV
KLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccactgataattcagaatcttccgcaacggcacgcgctaacggcactagtctc
tctggcggttctgccagtgaagcagccgtccctgccgtaaagaagacggcaaagaaagtt
gcggcaaagaagacggcccgcaaggtcgctcggaaagctgctccgcgcaaagctgagccg
gtatccacaacagtgggtcccgtcggcggtattgaagctgaatcctccaccgcgtcatcc
atcgaaccggattctgtcgagttgaaggattctgctcccgtgaaaaaagcggctaagaaa
accgctaaaaaggtagccaagaaagcagtcaaaaaggcagctaaaaaaactgccaaaaaa
gcagcgaagaaagcacctcaacgtgcatccaaggtcaaagagccagtagagatttctcct
gaattggaagttaccgatgaagatgatctcgaagctgacgacgccgacgattacgatcct
ctcagtgacgcagaggatgatcttcatgatgaagaagacgacctcgtatcggtcctcgac
gatgacgatgaggaagacacctcagaggaatctgaggaagatgaggaagacgaggggtct
tctgtctgggacgaggatgagtccgcggcattacgccaagcacgtaaagatgccgagctt
acagcttctgcagactcggtgcgcgcttatctgaagcagatcggtaaagttgctctcctt
aatgcagagcaagaagtctccctagctaagcgtattgaggcgggtctttatgccacttac
cgcatggagcagatggaagaggcttttaacaacggcgataaggaagcaaagctaacgcct
gcagttaaacgcgatctccgcgctatcgctcgcgatgggcgtaaggctaagaatcatttg
ttagaagccaacctgcgcctcgtggtttctttagctaagcgttataccggtcgcggtatg
gctttcttggacttaatccaagagggcaaccttggacttatccgcgcagtggaaaagttc
gattacaccaagggatacaagttctccacgtatgctacctggtggatccgacaagccatt
acccgcgcaatggcggatcaagcccgaaccatccgtattcctgtccatatggtagaggtc
atcaataagctgggtagaatccagcgtgagctgctccaggatttgggacgcgagcccact
ccgcaagagctggccaaggaaatggatatcaccgaggaaaaggttctcgagatccaacaa
tatgcgcgcgaaccgatctctctcgatcagactatcggcgatgaaggcgacagtcagctt
ggtgactttatcgaggattccgaggcagttatcgctgttgacgcagtttcctttacgttg
ctgcaagaccagctgcaggatgttctccacaccctctcagagcgcgaagccggcgtggtc
aaactccgttttggcctcaccgatggcatgccccgaactctcgatgagatcggccaggtt
tatggagttacccgtgagcgtatccgccagatcgagtctaagactatgtccaagctacgg
cacccttcgcgttcccaggttctccgtgattaccttgattaa
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