Corynebacterium pseudotuberculosis CIP 52.97: CPCIP5297_07080
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Entry
CPCIP5297_07080 CDS
T02054
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
coi
Corynebacterium pseudotuberculosis CIP 52.97
Pathway
coi03030
DNA replication
coi03430
Mismatch repair
coi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPCIP5297_07080
03430 Mismatch repair
CPCIP5297_07080
03440 Homologous recombination
CPCIP5297_07080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coi03032
]
CPCIP5297_07080
03400 DNA repair and recombination proteins [BR:
coi03400
]
CPCIP5297_07080
Enzymes [BR:
coi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPCIP5297_07080
DNA replication proteins [BR:
coi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPCIP5297_07080
DNA repair and recombination proteins [BR:
coi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPCIP5297_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PTCB-BRCT
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
AEQ06919
LinkDB
All DBs
Position
1525205..1526566
Genome browser
AA seq
453 aa
AA seq
DB search
MADAIHAHGATVLIDIDQITITPSLLHTALATEPTVIPFNSVDSVSMKRPSDGYDCGIVN
ISCASVTTQLEFSPNQSDEQQAFIAAATAALNGQAPAHRAVPGLDFAAVDVETANDDWGS
ICQIGVVKVKDGVITDKCEWLCQPPAAINHFAPANIAIHGIRPNDVKTAQPFSECFAEML
SFVGKLPLAAHNAQFDMTAFFRAAQAENLVFPTVAFGCSLALSRAANLGTPNHKLPTVAK
HLNVGLTNHHNATADAAACAEIIIKLAQKSAVKGSFADVCALLGFAQGQLSAQRVYPVLK
KKSSTSLVESSARIATQPPLDQTQTEVKTAVPRKQKAKTAPWAKAAAPETVPEANLDADP
HGRLFQQNVTLTGDFEPFDKGKLWDSIAEQGGTIGKNVTKKTTILVCGPWASKTSKQKRA
EELIDKGQNIQIWTAEDLFAQLGLDPADEQPPF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgattcatgcgcacggtgctactgtcctcatcgatatagaccagatcacg
atcacaccatcgttgctgcacaccgcattagccacagagcctactgttattcccttcaac
agcgttgattctgtatcaatgaagaggccgtccgacggatacgattgcgggatagtaaat
atcagctgtgcatccgttacaacacagcttgagttcagtcccaaccagtcagacgaacaa
caagccttcatagctgccgctaccgccgcgcttaatggtcaagctccagcgcaccgagca
gtccccggtttggattttgctgctgtcgatgtagaaacagccaatgatgattggggatcc
atctgccagattggagtggttaaggtaaaggatggagtaatcacggataagtgtgagtgg
ctctgtcaaccgcctgccgcaatcaatcattttgcgccggcgaacattgccattcacggt
atccgccccaacgatgtaaaaacagcccagcctttttctgagtgttttgctgagatgctt
agtttcgtcgggaagctcccgctagcagcacataatgcgcagtttgacatgacagcattt
ttccgtgctgcgcaggctgaaaacctggtttttcctactgtcgcttttggatgctcactt
gcactgtcgcgtgcagcaaacctaggaacccccaaccacaagcttcctaccgtagctaag
cacctcaatgtgggtttgaccaaccatcataatgccactgcagacgcagctgcttgtgca
gaaattatcataaaactcgcgcaaaaatctgctgttaaaggcagctttgccgacgtctgt
gcgttacttggttttgctcaaggccagctttctgcccaacgcgtatatccggtgctgaag
aaaaagtcttcgacttctctcgtagaatcctccgcacgcatcgcgacacaacctccactg
gatcaaacgcagactgaggtaaaaaccgccgtacctcggaagcaaaaagccaagaccgca
ccatgggcaaaagctgcggcaccggagactgtaccggaggctaatctggacgccgatcca
cacggtaggctcttccaacaaaatgtcacgcttactggcgattttgagccttttgataag
ggaaagctttgggactccattgctgaacaaggcgggacgatcggcaaaaatgtaaccaaa
aagacgacaatccttgtctgcggtccttgggcctctaagacctccaaacaaaagcgcgct
gaagagctaatagacaaaggccaaaatattcagatctggacagctgaggacctttttgct
cagctcggactcgaccctgcagacgaacaacccccgttctaa
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