Campylobacter ornithocola: CORN_0954
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Entry
CORN_0954 CDS
T06736
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
coj
Campylobacter ornithocola
Pathway
coj03030
DNA replication
coj03430
Mismatch repair
coj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
coj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CORN_0954 (dnaE)
03430 Mismatch repair
CORN_0954 (dnaE)
03440 Homologous recombination
CORN_0954 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coj03032
]
CORN_0954 (dnaE)
03400 DNA repair and recombination proteins [BR:
coj03400
]
CORN_0954 (dnaE)
Enzymes [BR:
coj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CORN_0954 (dnaE)
DNA replication proteins [BR:
coj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CORN_0954 (dnaE)
DNA repair and recombination proteins [BR:
coj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CORN_0954 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QKF57468
LinkDB
All DBs
Position
complement(932060..935653)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELAKTLKAQGATSVAMTDHGNMFGAIDFYKTMRSEGI
KPIIGLEAYLHNHDDLSDKSSRQRFHICLFAKNEIGYKNLMYLSSQSYIHGLYYYPRINK
KLLEAHSEGLICSSACLQGEVNWHLNTKNERNLKFGAKGYEGAKEAALWYKKVFGDDFYL
EIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDP
GRLRHEVHEFYVKTPEQMSELFADIPEAIENTQEIANKCNLELKLGDPTPPNFKFTREYA
KKYGLSLSQEDQEFSFDNDDIVFEYLCKKGLEERLQFIDESKHQEYKDRLDLEISIIKNM
KFSGYMLIVHDFIAAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPE
RVSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPD
ADALAKLVPEELKITLEKAYEQEPKIAEFVNSHPKGHQVWDFAKALEGLNRNAGMHAAGV
VISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVINNAIKLVK
KRYGKDVVWEKVNMNDPKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDLIAVLAL
YRPGPLDSGMVDDFIDIKHGRKAATYAFEDLKPILENTYGVIVYQEQVMQIVQKIGGFSL
GGADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSINKAQRE
FSATKLEDGSEAIIYGLGAIKSVGIPAIENIMAIRKEEGFSDFDDFISSIDPTKINKKTI
ENLAKSGAFDEFGYTRKCLVDNLELISETSRKIAEVKRNSTTSLFGEEEIAADIKVGLHD
SKIEFEIMEKLGYEKEILGIYVSGHPLDKFASQIEGIEYFKSMDFETLKGEGELLVVGKI
EDFKSMMSKSGKRYAKAVILDFYSSFDMIVFEAQVEKVEALFKESKDEAFAFLLRYKNND
NDLSFSLNEIYTLEEAKENELKSFSKRKSFAKKENKEEFTQEPMKFEENIIELDINKLSK
DMVYEIYDLANTRHNPKDTNNKKLVLKVLDMGSCLLYHTNFVLSQEAMDVIAQKCKG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttacacatttacatttacatacagaatattctttacttgatggagcaaat
aaactcaaagagcttgctaaaacgctaaaagctcaaggtgcaactagtgttgctatgact
gatcatgggaatatgtttggagctattgatttttataaaacgatgagatctgaagggatt
aaacctatcataggacttgaagcatatttacataatcacgatgatttaagtgataaaagt
tcaagacagcgttttcatatttgcttatttgctaaaaatgaaattggctataaaaatttg
atgtatttaagctcgcaaagctatatacatggtttgtattattacccaaggattaataaa
aagcttttagaggctcatagcgaaggcttgatttgttcatcagcttgtttacaaggtgaa
gttaattggcatttaaataccaaaaatgaaagaaatttaaaatttggcgcaaaaggctat
gaaggtgcaaaagaagctgcactttggtataaaaaggtttttggagatgatttttacctt
gagatcatgcgtcatggtattgatgatcaaaaatttatcgatgattctatcattaaactt
gctaaagagcttgatataaaaatcatcgcaaccaatgatacgcactatacttttaaagaa
agagcagccgcgcatgaagtgtttatgtgtatagctatgggggttaagcttgatgatccg
gggcgtttaagacatgaagtgcatgaattttatgtaaaaacgccagaacaaatgagtgag
ctttttgcagatattccagaagctattgaaaatactcaagaaatagctaataaatgcaat
ctagaattaaaactaggcgatcctactccaccaaattttaaatttacccgtgaatatgcg
aaaaaatatggcttaagtttaagtcaagaagatcaagaatttagctttgataatgatgat
atagtctttgaatatctttgcaaaaagggcttagaagaaagacttcaatttatcgatgag
agtaagcatcaagagtataaagataggcttgatttagaaattagtattattaaaaatatg
aaattttcaggttatatgcttatcgttcatgattttatcgccgcagctaaggaaaaagat
ataccagttggaccagggcgtgggagtgctgcggggagtttggtttcgtattgtttgaaa
attacagatttagatcctataccttataatcttctttttgagagatttttaaatcctgag
cgtgtatcaatgcccgatattgatgtggatttttgtcaagatagaagaggggaagtgatt
gattatgtgatcgataaatacggagccgaaaaggttgcacaagtcattacctttggtaag
cttttggcaaaaggagtgattcgtgatgtggctagggtttgtgatatgagtatacctgat
gcggatgctttggcaaaattagttcccgaagagctaaaaataacactagaaaaagcttat
gagcaagagccaaaaatcgctgaatttgtaaattctcatccaaaaggacatcaagtttgg
gattttgctaaggcgttagaaggattaaatagaaatgctggtatgcacgcagctggagtg
gtgatatctaatgaagcattgtggaataaagcaccgctttttagacaaagtaaaaacgat
gaacgtcatttagtaacgcagtattctaaagaatatcttgaagatgtggatttaattaaa
tttgattttttaggtcttaaaactttaactgttattaataatgcaattaaattggttaaa
aagcgttatggtaaagacgtggtttgggaaaaagtcaatatgaatgatcctaaggtttat
aaaaccatacaaagtggtaataccttgggcattttccaaatagaatcaggtggtatgcag
agtttgaatgctaggttaaagcctgagaggtttgaagacttgatagcagttttagcttta
tatagaccaggaccacttgatagtgggatggtggatgattttatcgatatcaaacatggt
agaaaggctgctacttatgcgtttgaagacttaaaacctatacttgaaaacacttatggg
gttatagtttatcaagagcaggttatgcaaatagtacaaaaaatcggtggtttttcttta
ggtggtgctgataatgtacgccgtgccatgggtaagaaaaaaagagaaattttggacaat
cttaaggcagagtatttagaaggtgctaaaaaacaaggctatgatgagaaaaaggctgat
gatttgtttgagcttattttgaaatttgctgaatatggttttaataaatctcactcagct
gcctatgcacttataacctttcaaacagcgtatttaaagacttactatccaagtgagttt
atggccgcgcttttaacaagtgaagagagcaatgtagataaggtcgcaaaatacatagaa
gaaatgaaaagaatgaatatcaagcttttaccaccaagcattaacaaagctcaaagagaa
tttagtgcaactaagcttgaagatggttctgaagctattatttatgggcttggagcgatt
aaaagcgtgggaattcctgcgatagaaaatatcatggctattcgcaaagaagaaggtttt
agtgattttgatgattttataagctctattgatcctactaagattaataaaaaaaccata
gaaaatttagctaaatcaggtgcttttgatgagtttggttatactagaaaatgtttagta
gataatcttgagcttatttcagaaacaagtagaaaaatcgctgaggttaaaagaaactct
actacttcgctttttggagaagaagaaatagctgcagatattaaagtagggcttcatgat
agtaaaattgaatttgaaataatggaaaaactaggctatgaaaaagaaattttaggaatt
tatgtatcaggacatcctttagataaattcgcaagtcaaatagaaggcatagagtatttt
aaaagtatggattttgaaacacttaaaggcgaaggtgagcttttagttgtaggaaagatt
gaagattttaaatcgatgatgagtaaaagcggtaaaagatatgctaaagctgtgatttta
gacttttattcttcttttgatatgatagtttttgaagcccaagtagaaaaagttgaagcg
ctttttaaggaaagtaaggatgaggcctttgcttttttgctaagatataaaaataatgat
aatgacttaagctttagtttaaatgaaatttatactctagaagaagcaaaagaaaatgag
ttaaaatcttttagtaaaagaaaaagttttgcaaaaaaggagaacaaagaagaatttaca
caagaacctatgaaatttgaagaaaatatcatagaacttgacattaacaaacttagcaaa
gatatggtgtatgaaatttatgatttagctaatacaaggcataatccaaaagataccaac
aacaaaaaacttgtgttaaaagtacttgatatgggtagttgcttgctttatcacacaaat
tttgttctctcacaagaagctatggatgtgatagctcaaaaatgtaaaggttga
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