Campylobacter ornithocola: CORN_1122
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Entry
CORN_1122 CDS
T06736
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coj
Campylobacter ornithocola
Pathway
coj03420
Nucleotide excision repair
coj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CORN_1122
03430 Mismatch repair
CORN_1122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coj03400
]
CORN_1122
Enzymes [BR:
coj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CORN_1122
DNA repair and recombination proteins [BR:
coj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CORN_1122
MMR (mismatch excision repair)
Other MMR factors
CORN_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QKF57634
LinkDB
All DBs
Position
1103609..1105672
Genome browser
AA seq
687 aa
AA seq
DB search
MSFFEGLNDSQKEAIMHIDGAILILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKI
LKDLASENLQSSLASISAYISNFKNQSKSAQEICKELEFLKDEKNKNYEEIIHLYEQYEH
FLIQNNFMDFDDLLMLTNKILENEDFAKEQSQKYAYITVDEYQDTNALQYQILKKLCTSH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKILICTKDKGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSIYKIKEKDDLLAMILA
LEEEFKIKEFYKDNPEGEDKLLNIDELYANLKDKITHGNYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVIKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttgaaggtttaaatgatagccaaaaagaagctattatgcatattgatggg
gctatacttatactagcaggtgcgggcagtggaaagactaaaaccattaccactagactt
gcttatttgatcgatcatgtaggtattcctgcgcaaaataccctcacactaacctttaca
aataaagctgccaatgtaatgaaaacaagagccttagcgcttttacaagatcaaaattta
cacaatccccttttatgcacttttcataaatttggcttgttgtttttaagactttatagt
gaaagaattaatagagcaaataattttgtcattatcgatacagatgataaaaagaaaata
ttaaaagatttagctagcgaaaatttacaaagctctttagcaagcataagtgcttatatt
tcaaattttaaaaatcaaagcaaaagtgcccaagaaatatgcaaagaattagaattttta
aaagatgaaaaaaataaaaattatgaagaaatcattcatttatatgaacaatatgagcat
tttttaattcaaaacaatttcatggattttgatgatttgttaatgctaactaataaaatt
ttagaaaatgaggattttgcaaaagaacaaagtcaaaaatatgcttatataacagtagat
gagtatcaagataccaatgctttacaatatcaaattctaaaaaaactttgcacatctcat
gaaaatatttgcgtagtaggtgatgatgatcaaagtatttatggttggcgtggggctaaa
atagaaaatatcttaaatttcaaagaacaatttaataatgtaaaattagtcaaattagag
caaaactaccgctcaactagtgctattttacaagctgcgaatgagcttatagagcataat
agaaaaagattaggaaaaattttaatttgcaccaaggacaagggtgaagaaattacgatt
ttacaaaatgatgatgaaaaaattgaaagttttaaggttgcaagagaagtttcaaaactt
ttaaattcaggaattaatcctagtgaaatagccatactttatagagtaaatgccctatct
cgtgcgcttgaagaagcttttagcaaggaaaaaattccttttaaactactaagtggaatt
cgtttttatgaaagagctgaaattaaagatattatttcttatttaagattactttcaaat
ttaaacgatgattattcttttaaacgcattatcaaccgccctaaaagaaattttggtaat
gcaagtctagaaaagctagaaaattatgctaaagaaaatcatttatctttatttgaaagt
ctctgtgctttgcaaggaagtgggttttttagcaaaaaaacagacaaagaattagaaaaa
ttcatactaagcatatacaaaatcaaagaaaaagatgatttacttgcaatgattttagcc
ttagaagaagaatttaaaatcaaagaattttacaaagataacccagaaggcgaagataaa
cttttaaatatagatgagctttatgctaacttaaaagataaaattactcatggaaattat
aacggtttagatgatattttaaatgaaatttctttacttaatgagcaagatgggcttgat
aaagaaagtatttgtattatgagtattcatgcaagtaaaggacttgagtttgattatgtt
tttatcataggattagaagaaggatttttcccactcactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtagcaattactagagccaagaaaaaactttatttaagt
tatgctaattctagattttataaaggaagtcgcacaagactagaaaaaagtagatttttt
ggcgagagtaatgtaattaaaaaagaattaacactagatcatcaaaaaaattgctataaa
aaaggtgatttaatcaaacataaaatttttggtataggtagagtcactggggtaagtaaa
ataggtgctgaagaaaaactcacgattaattttggaggcatagaaagaatgataatgtca
agttttgtggaaaaagtgatatga
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