Campylobacter ornithocola: CORN_1257
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Entry
CORN_1257 CDS
T06736
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
coj
Campylobacter ornithocola
Pathway
coj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
coj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CORN_1257 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coj03400
]
CORN_1257 (uvrB)
DNA repair and recombination proteins [BR:
coj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CORN_1257 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CORN_1257 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
UB2H
Microtub_bd
Focal_AT
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QKF57765
LinkDB
All DBs
Position
1241266..1243239
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AA seq
657 aa
AA seq
DB search
MFKLTSDFKPSPDQKQAIDGIVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFASNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVICIASVSANYGLGNPSEYVGMVLILELNMQINQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGNELESMYHYNVLENKKGKDLRKFIL
YPTSQFSVGETRLKEAIKGIKAELNERLAYFEHENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIIDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKKNIFYQIMRPTGLLD
PKIEIKDSDNQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRVLQEAYNKRYNITPTSVKRNIEESLKQD
LEQGEIYRKGKELEKIPAKERAKIVKELRKQMLEAAKNLEFEKAAMLRDEINKLRIL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacttactagcgattttaaaccaagccctgatcaaaaacaagctatagatggt
atagtaaaaagcattaaagcaggaaataaatatcaaaccttactaggtgttacaggtagt
ggaaaaacttttactatggcaaacatcatcaaaaatttaaatatgcccacacttatcatg
tcgcacaataaaagcttatgtgcacaactttatagcgaatttaaaggtttttttgctagc
aatcatgtggaatattttataagttattatgattattatcaacctgaagcttacatacca
agaactgatgtttttatagaaaaagacagctctactaatgaagatttagaaagattaaga
ttaagcgcaagtgcttctcttttaagttatgatgatgttatttgcatagcaagtgtttca
gcaaattatggtttaggaaatccaagcgaatatgtaggcatggttttgatcttagagctt
aatatgcaaataaatcaaaaagagcttttaaaaaagcttgtagatatgggctataaacgc
aatgataatttcttcgacagggctgattttagagtaaatggtgatatagtggatatatat
ccagcttattatgaagatgaggccattagacttgaattttttggtaatgaacttgaatcg
atgtatcattacaatgtattagaaaacaaaaaaggtaaagatctaagaaaattcatactt
tatccaactagtcaatttagtgtaggcgaaacaagactcaaagaagctatcaaaggtata
aaagctgaattaaacgagcgtcttgcttattttgaacacgaaaataaactcgtagaagca
caaagattaaaacaaagagtagaatttgatcttgaaatgctccaaagcacaggtatgtgc
aagggagtggaaaactatgccctacatttaacagggcttaaaagtggagatacaccttat
acactttttgattattttgctattaaaaatcaagattttttggtaattattgatgaatct
catgtgtctttaccgcaatttcgtggaatgtttgcaggagatagaagtagaaagcaaact
ttggttgactatggttttcgcttgccaagcgccttagataatagacctttgatgtttgat
gaatttattaataaaaattgcaaatttttatttgtttcagccacgcctgcacctttggaa
ctagaattaagcaaaaaaaacattttttatcaaattatgcgcccaacaggacttttagat
cctaaaatagaaataaaagatagtgataatcaagttgaaattttatatgatgaagctaaa
aaagttatagaacgtaacgaaagagttttaatcacagttctaaccaaaaaaatggccgaa
gaacttagcaaatactacttagagcttggtttaaaagtaaaatacatgcattcagaaatt
gacgcaattgagcgtaatgaaattattcgtggtttaagaagtggtgcttttgatatttta
ataggtattaatcttttaagagaaggacttgatttacctgaagtttctctcatagcaatt
atggacgcagacaaagagggttttttaagaagtaccactgcgctcattcaaaccatggga
cgtgcggctagaaatgtaaatggcaaagtattgctttttgccaaaaaaattacaaaatct
atgcaagaagccattgataccaccaacgaaagaagagtcttgcaagaagcttataataaa
agatataatatcacgccaacttcagtaaaaaggaatatagaagagagtttaaaacaagat
cttgaacaaggagaaatttatcgcaaaggaaaagaacttgaaaagatacctgcaaaagag
cgtgccaaaatagtaaaagaactaagaaaacaaatgttagaagcagctaaaaatcttgaa
tttgaaaaagcagcaatgcttagagatgaaattaacaaactaagaattttatag
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