Corynebacterium occultum: COCCU_01375
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Entry
COCCU_01375 CDS
T07880
Symbol
dnaX1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cok
Corynebacterium occultum
Pathway
cok03030
DNA replication
cok03430
Mismatch repair
cok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCCU_01375 (dnaX1)
03430 Mismatch repair
COCCU_01375 (dnaX1)
03440 Homologous recombination
COCCU_01375 (dnaX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cok03032
]
COCCU_01375 (dnaX1)
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_01375 (dnaX1)
Enzymes [BR:
cok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCCU_01375 (dnaX1)
DNA replication proteins [BR:
cok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COCCU_01375 (dnaX1)
DNA repair and recombination proteins [BR:
cok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COCCU_01375 (dnaX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
TFIIA
Mg_chelatase
AAA_14
DnaX_C
Rad17
AAA_16
AAA_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QGU06236
UniProt:
A0A6B8W5P6
LinkDB
All DBs
Position
292054..294525
Genome browser
AA seq
823 aa
AA seq
DB search
MALYRKYRPASFAEVVGQEQVTGPLSVALDTGRINHAYLFSGPRGCGKTSSARILARSLN
CAEGPTSRPCGVCNSCVSLAPGGSGNLDVTELDAASHNGVEDMRELRDKAHYAPAESRYR
VFIIDEAHMITPQGFNAMLKIVEEPPEHLIFIFATTEPEKVIGTIRSRTHHYPFRLLTPG
DMRGLLQRTVESEGVHVQDEVYPLVIEAGGGSPRDSLSILDQLVAGSGPDGVSYDEALGL
LGVTDLSLIDATIDCLAVDDKAGLFQVVDDVIEAGHEPRRFVTDLLNRLRDLMVLRAVPE
AIEMGLVTAPTARAEILQEEATRFSDAQLAHLATQVNARISDMKGATSPRLLLEILIAHL
LLPAAPVAAPGAAVAPVGPGVANGQGTTYERPSVRRAREAAERAAREASTTQNVTTPAAP
QPVPQEQPQPVPQPLAQQPEKQPTQQQPAQQEPAPQPAQQPPAPQEAPRTVTPAAVPEDV
VEAVRTEWARLRVEVGKRNKVAEIMLTEAHVLGLKEDTLVLGHNTGALAGRLNEASKNEV
IVAVLRDEMGLNLKVHCVVGTNPEAMGFAPPAAVKKAWNPNETQAVGSAGQPPQASRLRE
PADSAEEPAQPTPTPEPTPTPQHPTSGAVWGAPAPIGGAPQAPKNPPTQQATPAPQPQQS
APTWGSPAPLGGPPAPVPPEAPEPAPEVVPQPEEPRLRRWEQAAARGQATMAQRDQRPQF
SDGVPLPPEPSSADVPADPYDYPADEGIPDRSGLRASQPAPSPAPAGQPESAASQSGSSA
ADRRRAEEDEMLAASLEPGQLDRRDAKDIAMELLAKELGARPL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtatcggaaatatcgtcccgcctccttcgccgaggttgtcggccaggaacag
gtgaccggcccattgtcggttgcgctggacactggccgcatcaatcacgcctaccttttc
tctggtccgcgtggttgtggcaaaacctcctcggcccgtattctggcgcgttccctgaac
tgcgcggagggtccgacctcccggccctgtggggtctgtaattcctgtgtttcattggcg
ccgggtggctcgggcaacctggatgtcaccgagcttgatgccgccagccataacggtgtc
gaggacatgcgtgagctccgcgataaggcacattatgctcccgcggagtcccgctaccgg
gtcttcatcatcgatgaagcacacatgatcaccccgcagggtttcaacgcgatgctcaag
atcgtggaggaacccccggagcatctgatcttcattttcgcgaccacggagccggagaag
gtgatcggtacgattcgttcgcgtacccaccattaccccttccgactgctcaccccgggt
gatatgcggggcctgctgcagcgcaccgtcgagtccgagggggtgcacgtccaggatgag
gtgtaccccctggtcatcgaggccggcggcggttccccccgtgattccctctccatcctg
gaccagctggtcgccggttccggcccggacggagtctcctatgatgaggccctcggcctg
ctgggtgtcaccgacctttcgcttatcgacgccacgatcgactgcctcgccgtcgatgac
aaggccggcctctttcaggttgttgatgatgttattgaggcaggtcatgagccccgtcgt
ttcgtcaccgacctgctcaaccgactgcgggacctgatggtgctgcgcgcggtaccggag
gccattgaaatgggcctggtcaccgcaccgaccgcgcgtgccgagatcctgcaggaggag
gccaccaggttcagcgacgcccagcttgcccacctggcgacgcaggtcaacgcgcgcatc
tcggatatgaagggcgccacctccccccgcctgctgctcgagatcctcatcgcccacctg
ctgctgcctgcagctcccgtcgccgcccccggtgcagcggtagctccggtcggtccgggg
gtcgcgaatggtcagggcactacctatgagcgtccttcggtgcggcgcgcccgcgaagcc
gcggagagggccgcccgtgaggcgtccacgacacagaacgtaacgacgccagcggcaccg
cagcctgtgccccaagaacaaccgcagcctgtgccacagcctctcgcgcagcaaccggaa
aagcaacccacgcagcaacaacccgcgcagcaggaaccagcaccgcagcccgcgcagcag
cctcccgcaccccaggaagctccccgaactgtcaccccggccgctgtcccggaggacgtt
gtcgaagcggtccgcaccgagtgggcccggctgcgtgtggaggtgggtaaacgcaacaag
gtcgccgagatcatgctcaccgaagcccatgtcctaggcctcaaggaggacaccctggtg
ttgggacacaacaccggggccctggctggtcgtctcaatgaggccagcaagaatgaggtg
atcgtggcggtgctgcgcgatgagatgggtctgaatctgaaggtccattgcgtggtgggt
accaaccctgaggccatgggtttcgcgcctcccgccgcggtgaagaaagcctggaatccc
aatgagacccaggctgtcggttctgccggtcaacccccgcaggcttcccgcctgcgggag
cccgctgattccgccgaggagccggcgcagccgaccccaacccctgaacccaccccgacg
ccgcagcatcccacctcaggtgcggtgtggggtgctccggctccgattgggggtgccccg
caggccccgaagaatccacccactcagcaggccacgccagcaccgcagccgcagcagtcg
gcccccacctgggggagcccggcacccctgggaggcccacctgccccagtaccgccggaa
gcaccggagcctgcccctgaggtagtgccccagccggaggagccacgcctgcgacgttgg
gaacaggccgctgcccgcgggcaggccacgatggcgcagcgcgatcagcgaccccagttc
tccgatggggtgccgttgccgccggaaccttcttccgctgatgtgcctgctgatccctat
gattatccggctgatgagggcattccggaccgcagtggcctccgggcctcgcagcccgcg
ccgagcccggctccggcggggcagccggagtccgcggcgtcgcaaagcggttccagcgcg
gcggatcgacgacgcgccgaggaagatgagatgttggcggcctccctggaacccggtcag
ctggatcgtcgggatgcgaaggatatcgcgatggagcttttggcgaaggagctgggcgcg
cggccgctgtga
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