Corynebacterium occultum: COCCU_01880
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Entry
COCCU_01880 CDS
T07880
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cok
Corynebacterium occultum
Pathway
cok00061
Fatty acid biosynthesis
cok00071
Fatty acid degradation
cok01100
Metabolic pathways
cok01212
Fatty acid metabolism
cok02024
Quorum sensing
cok04146
Peroxisome
Module
cok_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
COCCU_01880 (fadD)
00071 Fatty acid degradation
COCCU_01880 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
COCCU_01880 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
COCCU_01880 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cok01004
]
COCCU_01880 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cok04147
]
COCCU_01880 (fadD)
Enzymes [BR:
cok01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
COCCU_01880 (fadD)
Lipid biosynthesis proteins [BR:
cok01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
COCCU_01880 (fadD)
Exosome [BR:
cok04147
]
Exosomal proteins
Exosomal proteins of breast milk
COCCU_01880 (fadD)
Exosomal proteins of breast cancer cells
COCCU_01880 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QGU06335
UniProt:
A0A6B8W4Q4
LinkDB
All DBs
Position
complement(401965..403671)
Genome browser
AA seq
568 aa
AA seq
DB search
MSAFETKAWLQYYPDWTPHSLDYEQTTLLDIYDNNLAIKADKPATNFFGRTQTYGELDRQ
VRRAAAGLRAFGVRPGDKVAIVLPNCPQHIAAFYAVLKLGATVVEHNPLYTAHELEKPFA
DHGARVAIAWDKAAPTLEKLRETTSLETIISVNMIEAMPKVQQLALRLPIPALKKSRASL
SEPAPNSVPWEALIGSAIGGDGADIESSPEVTKDTIALILYTSGTTGAPKGAQLSHGNLF
ANLLQGKAWVPGLGEKDEKMLAALPMFHAYGMTMVGTLGVYIGAEMILLPTPRIDLIMKV
MKKNTPTWLPGVPTIYEKIVEAAEKDNIDISGVDNAFSGASTLPVSTVERWERATGGLLV
EGYGLTETSPIIVGNPMNTNRRPGYVGIPFPDTEVRIANPENLSETLPDGQEGEVVVRGP
QVFQGYLNQPEATESSFHEDWYRTGDIGVMEEDGFIRLVARIKEVIITGGFNVYPAEVEE
VVTGHPDVVGAAVVGLPREDGSEEVVAAITLREGAAMDPEALKEYARERLTRYKVPRRFY
HFEELPQNMMGKVLRREVQDLLIKQQQK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcattcgagacaaaggcctggctccagtactacccggattggacgccgcactcg
ctggattatgagcagaccaccttgctcgacatctacgacaacaacctcgccattaaagcg
gataagccggccacgaatttcttcggccgcacccagacttacggggagctggatcgccag
gtccggcgggccgccgccgggttgcgggcttttggggtccgccccggtgacaaggtcgcc
attgtactgccgaattgtccgcagcatatcgccgctttttatgccgtcctgaagctgggt
gcgacagtggtggagcataatccgctctacaccgcccatgagctggaaaagcccttcgcc
gatcatggtgcccgggtggcgatcgcctgggacaaggccgccccgacgctggagaaactg
cgggagaccacctctttggagaccatcatctcggtgaacatgatcgaggcgatgccgaag
gtgcagcagctggcgctgcgcctgccgatcccggcgttgaagaagtcccgcgcatcgctc
tccgagccggcccccaactcggtgccctgggaggccctgatcgggtcggccatcggtggt
gacggtgccgacatcgagagcagcccggaggtgaccaaggatacgatcgccctgatcctc
tacacctcgggcaccaccggtgcaccgaagggcgcgcagctttcccatggcaacctcttc
gccaacctgttgcagggcaaggcctgggttcccggtctgggtgagaaggacgagaagatg
ctcgccgccctgccgatgttccacgcctatggcatgaccatggtgggcactctgggtgtc
tacatcggggcggagatgatcctgctccccaccccacggatcgacctgatcatgaaggtg
atgaagaagaacaccccgacctggttgccgggggtgcccaccatctacgagaagatcgtc
gaagccgccgagaaggacaacatcgacatctcgggggtcgacaacgccttctccggcgcc
tccaccctcccggtgtccacggtggagcgttgggaacgcgccaccggtggcctgctggtg
gagggttatggcctcacggagacctccccgatcatcgtgggcaacccgatgaacaccaac
cgccgccccggctatgtcggcatccccttccctgacaccgaggtgcgcatcgcaaacccg
gagaacctctccgagaccctgccggacgggcaggagggtgaggtggtggtccggggcccc
caggtgttccagggttatctcaaccagccggaagccaccgaatccagcttccacgaggac
tggtaccgcaccggtgatatcggggtgatggaagaggacggtttcatccgcctggtggcc
cgcatcaaggaggtcatcatcaccggcggcttcaatgtctaccccgctgaggtggaggag
gtcgtcacaggtcacccggatgtcgtgggggccgccgtcgtcggcctgccccgcgaggac
ggttccgaggaggtcgtcgccgcgatcaccctgcgcgagggtgccgccatggatccggaa
gcgctgaaagagtacgcccgcgagcgactcacccgatacaaggtgccgcgccgtttctac
cacttcgaggaactgccgcagaacatgatgggcaaggtactacgccgcgaggtgcaggac
ctcctcatcaagcagcagcagaaataa
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