Corynebacterium occultum: COCCU_03515
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Entry
COCCU_03515 CDS
T07880
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cok
Corynebacterium occultum
Pathway
cok03420
Nucleotide excision repair
cok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCCU_03515 (uvrD2)
03430 Mismatch repair
COCCU_03515 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_03515 (uvrD2)
Enzymes [BR:
cok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCCU_03515 (uvrD2)
DNA repair and recombination proteins [BR:
cok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COCCU_03515 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
COCCU_03515 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QGU06657
UniProt:
A0A6B8W3Y9
LinkDB
All DBs
Position
737086..740340
Genome browser
AA seq
1084 aa
AA seq
DB search
MSELISPVLLSKYLGQEHAPTPQQAEIIGAEPGPLLVVAGAGAGKTETMAARVVWLVANG
FATPDQILGLTFTRKAAQGLSQRIRKRLEVLAGIPKLRDLDPSGKLTRDLQAITPTVSTY
DSYAGRLIREYGLLAQVEPSARLITATEQYQIAAGLVREYRGRLDLGNTEATVIDKLLQF
SGELDNHMVDWEELGEESLAFTDNFLNLPKAPRQADKPTQKMQSYLDVQQHRLDFLPLVR
ELKQELKARNVITFGEQMSLAAGLAENHPQVGASQRRRFRVIMLDEYQDTGHSQRVLLRS
LFGTGEEGLTVTAVGDPMQSIYGWRGATSANLEAFVHDFPLPDGSPSPKKELTISWRNPP
EVLELANAVSREVLGEGEKRTVQPLEPRPGADAGEVRLEFHDTAVKERESVADWLAEHFH
AQQSAGKKFTGAVLVRKNASSPLIAEELTKLGIPNEIVGLSGLLYVPEVADVVAVATMLV
KPQDTSAALRILAGPHVGLGAKDILALSRRAANLAGRATREPLERTSSEDPLELLADVIA
ETLPADPEEVVGLADAVADLGEPERYSPVGYFRLRQLAAELRHLRTRNLSHSLSDLFAEI
EDVIGVRTEVLARQEPGSDGAVSTTHLDRLAEEVAAFGMIPGATLRGLLTYFEQAKASDK
GLDPGEVTVRSDRVQIMTVHKAKGLEWGHVAVMHADDRTYSAKAETWLTRVEEIPAALRG
DADSSPQLEGGAENRKEFELACKEYLGQVRQAQAEENTRLFYVAITRAESALMVSASELS
DTGTTCHPYENLEILRQIVPPATWFGEGTDAEGEAPQLPAPAEGYFPDLEVSPGVAEGAE
LVHEALRDIPRHTSDGGLFDLWERETSALIEEYEALSAAEVKVPLTRELTATDLVALKNN
PEQFAKRMRRPVPFKPNTYAKRGTAFHQWLEDRFGATALLDEDQLPGLGEEEVSSAELVH
LKDAFLDSQWAERTPEFVEQPFEVSIGDRVVRGRMDAVFRQGDEWLVVDWKTGQPPSGPE
MRAAIIQLAVYRLAWAQLRTREGEPAPQVRAAFHYVGQNHTFEPDVIPDAAELAALIEQG
STRV
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagctaatttccccggtcctgctgtcgaagtatctgggacaggagcatgccccc
accccgcagcaggcggagatcatcggtgctgaaccgggacccctgctggtggtcgccggg
gcgggggcaggcaagaccgagaccatggcggcccgggtggtgtggctggtggccaatggt
tttgccaccccggaccagatccttggcctgaccttcaccagaaaggcagcccaggggctg
agccagcgcatccgcaaacgcctggaggtgctcgccggcatccccaagcttcgggacctg
gatcccagcggcaaactcacccgcgatctgcaggccatcaccccgacggtgtccacctat
gactcctatgccggaagactgatccgggaatatggtctgctcgcccaggtggagccctcc
gcccggctgatcaccgccaccgagcagtaccagatcgccgccggcctggtccgggagtac
cgcggtcgcctggatctcggcaacaccgaggccacggtcatcgataagctcctgcagttc
agcggggagctggacaaccacatggtcgactgggaggaactgggggaggaatccctggcc
ttcacggataatttcctgaatcttcccaaggcgccgcgccaggctgataaaccgacccag
aaaatgcagagttacctggatgtccagcagcaccgcctggatttcctgcccctggtcagg
gagctgaagcaggaactcaaggcccgcaatgtcatcaccttcggggaacagatgagcctg
gccgccgggttggcggaaaaccacccccaggtcggtgcctcccagcgtcgtcgcttccgg
gtgatcatgctcgatgagtaccaggacaccggacattcccagcgggtgctgctgcgtagc
ctcttcggcacgggggaggagggtctcacggtcaccgcggtgggggatcccatgcagtcc
atctacggctggcgtggtgccacctccgcgaacctggaggccttcgtccatgatttcccg
ctgccggatggctcaccctccccgaagaaggaactgaccatctcctggcgtaaccccccg
gaggtgctggagctggccaatgcggtgtcccgggaggtgctgggggaaggcgagaagcgg
accgtccaacccctggaaccccgcccgggggcagatgccggtgaggtgcgcctggaattc
catgacaccgccgtgaaggaaagggaatcggtggctgactggttggcggagcatttccac
gcccaacagtcggccgggaagaagttcaccggcgcggtgctggtgcgcaagaacgcctcc
tccccgctgatcgccgaggagctcaccaaactcggcatccccaatgagatcgtcggcctg
tccggcctgctctatgtgccggaggtggcggatgtggtggcggtggccaccatgctggtc
aaaccccaggacaccagcgccgcactgcgtatcctcgccgggccgcatgtggggctcggt
gccaaggacatcctcgcgctttcccggcgcgccgcgaacctggcggggcgggccacccgg
gagccgctggaacgcacctcctccgaggatcccctcgagctgctggcggatgtcatcgcc
gagacgcttcccgccgacccggaggaggtggtcggcttagccgatgccgtcgctgacctg
ggggagccggaacgttatagtcccgtcggttatttccggctccgtcagctggccgcggag
ctgcgtcacctgcgtacccgtaatctctcccattcgctctctgatctcttcgcggagatt
gaggatgtgatcggggtgcgtaccgaggttctggcccgccaggaaccgggcagtgacggg
gcggtgagcaccacccacctggatcgtctggcggaggaggtcgccgctttcggcatgatc
cccggggcgaccctgcgcggcctgctcacctatttcgagcaggccaaggccagtgacaag
gggctggatccgggtgaggtcacggtgcgtagtgaccgcgtgcagatcatgaccgtccac
aaggccaagggcctggagtgggggcatgtcgcggtgatgcacgccgatgaccgcacctat
tcggcgaaggcggagacctggttgacccgggtggaggagatccccgcggccctgcgtggt
gatgcggactcctccccgcagctggagggtggggcggagaaccggaaggaatttgagctc
gcctgcaaggagtatctggggcaggtgcgccaggcacaggcggaggagaatacccgtctt
ttctatgtcgcgatcacccgggcggagtcggccctgatggtgtccgcctccgagctcagt
gacaccggcaccacctgccacccctatgagaacctggagatcctgcgccagatcgtgccg
cccgccacctggttcggggaggggacagatgctgagggggaggcaccgcagttgcctgcc
ccggcggaaggttatttccccgacctggaggtgtccccgggggtggcggagggtgcggag
ctggttcatgaggccttgcgtgatattccccggcacaccagtgacggggggctcttcgac
ctctgggagcgggagaccagcgccctgatcgaggagtatgaggccttgtccgccgctgag
gtcaaggtgccgctgaccagggagctgacggccacggacctggtggcgttgaagaataac
ccggagcagttcgccaagcggatgcgccgcccggtgcccttcaaacccaacacctacgcc
aagcggggtaccgccttccaccagtggctggaggaccgtttcggggccaccgccctgctg
gatgaggaccagctgccgggcctgggggaggaggaggtcagttccgcggaactggtgcac
ctcaaggatgccttcctggacagccagtgggcggaacgcaccccggagttcgtggagcag
cccttcgaggtgtccatcggggatcgtgtggtgcggggccggatggatgccgtcttccgg
cagggtgatgagtggctggtggtggactggaagaccggtcagcccccgagcgggccggag
atgcgggcggcgatcatccagctggcggtctaccgtctggcctgggcgcagctgcgcacc
cgggagggggaacctgcgcctcaggtgcgggccgccttccactatgtggggcagaaccac
acctttgaaccagatgtcattccggatgcggccgagttggcggcactgatcgaacagggg
agcactagagtttag
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