Corynebacterium occultum: COCCU_03675
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Entry
COCCU_03675 CDS
T07880
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cok
Corynebacterium occultum
Pathway
cok03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCU_03675
09124 Replication and repair
03420 Nucleotide excision repair
COCCU_03675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cok03021
]
COCCU_03675
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_03675
Enzymes [BR:
cok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCCU_03675
Transcription machinery [BR:
cok03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COCCU_03675
DNA repair and recombination proteins [BR:
cok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COCCU_03675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGU06684
UniProt:
A0A6B8VZD2
LinkDB
All DBs
Position
complement(774078..775805)
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AA seq
575 aa
AA seq
DB search
MGFGDGPLIVQSDKTVLLEIDHALAADARAALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDVLERYSRFPVPQALLIDVAETMSRYGRVRLHKHPAHGLLLESAEPAILAE
LQRHKKIKPMLGAPIDPESILVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIALSTE
NEDWELRDYQRYAADSFWEGGSGVVVLPCGAGKTMVGAASMARAQATTLILVTNTVAGRQ
WRDELIKRTTLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQG
FIATAECVEVRTTMSESERMVYATAESADRYRLAACAGSKLRVVEKLLAQHPGQPTLIIG
AYLDQLEELSARFQAPVIEGKTSNKKRQELFDKFRSGEVSVLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGGEAHFYSVVSRDSLDAEYAAHRQRFLAEQGYAY
RILDAEDLVVPPLPAEDTQISENNDAADAAEEELQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
ttgggcttcggtgacggccccctgatcgtccagtccgacaaaaccgtgctgcttgagatc
gaccacgccctggccgctgacgcacgcgccgcgctcgcccccttcgcggagctggagcgc
gcacctgagcatgtccacacctaccgcatcaccccgctcgcgctgtggaatgcccgcgcc
gccgggcatgatgcggagcaggtggtggatgtgctggaacgctactcccgcttcccggtg
ccccaggcactgcttatcgacgtcgcggagacaatgtcgcgctatggccgggtccgcctg
cacaagcaccccgcccacggcctgctcctggagtctgcggagcccgccatcctggcggaa
ctgcagcgccacaagaagatcaagccgatgctcggcgccccgatcgaccccgagagcatc
ctggtccacccctctgagcgggggcggttgaaacaggaactgctgaaggtgggctggccg
gcggaggacctggccggatatgtcgacggtgaagcccaccccatcgccctgtccaccgag
aatgaggactgggagctgcgtgactatcagcgctatgccgctgattctttctgggagggt
ggttccggggtggtggtgctgccctgcggtgccggtaaaaccatggtcggtgcggcatcc
atggctcgcgcccaggccaccaccctgatcctggtgaccaatacggtggccggccgacag
tggcgggatgaactgatcaagcgcaccacgctcaccgaggatgagatcggcgagtactcc
ggcgaaaagaaggagatccgcccggtgacaattgccacctatcaggtggtcacccgcaaa
accaagggtgagtaccgggcactggagctcttcgactcccgcgactggggcctgatcatc
tacgacgaggtgcacctcctgcccgccccggtgttccggatgacctccgacctgcagtcc
cggcgtcgcctgggactgaccgccaccctggtgcgggaggacggtcgggagggtgatgtc
ttctcgctgatcgggccgaaacgttatgatgccccctggaaggacattgaggcccagggt
ttcatcgccaccgcggaatgcgtggaggtccgcaccacgatgagcgaatcggagcggatg
gtctatgccaccgcggaaagtgcggaccgctaccgcctggcggcctgtgcgggttcgaag
ctgagggtggtggagaagctcctggcacaacatcccgggcagcccaccctgatcatcggt
gcctacctggatcagctggaggaactttcggcccgtttccaggcgccggtgattgagggc
aagacctccaataagaaacgccaggaactcttcgataaattccgttccggggaagtctcg
gtgctggtggtcagcaaggtggcgaatttctccatcgacctgcccgaggccgccgtggcg
atccaggtctcgggtacctttggttcccgacaggaggaagcccagcgtctgggtcgtctc
ctccgccccaaggccgatggtggggaggcccacttctactccgtggtcagccgggacagc
ctggacgcggagtacgccgcccaccgccagcggttcctcgccgagcagggttatgcctac
cgcatcctcgacgccgaggacctggtggttcctcccctgccggccgaggacacacagatc
agtgaaaacaacgacgcagctgatgcagctgaggaagaactccagtga
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