Corynebacterium occultum: COCCU_03810
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Entry
COCCU_03810 CDS
T07880
Name
(GenBank) type I restriction enzyme EcoKI subunit R
Organism
cok
Corynebacterium occultum
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Type_ISP_C
Mrr_cat_2
ResIII
DEAD
Helicase_C
N6_Mtase
SWI2_SNF2
Eco57I
Mrr_cat
UPF0020
Helicase_C_2
SLFN-g3_helicase
DUF234
AAA_22
DUF2884
Motif
Other DBs
NCBI-ProteinID:
QGU06711
UniProt:
A0A6B8W2K0
LinkDB
All DBs
Position
complement(802230..807158)
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AA seq
1642 aa
AA seq
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MGSMSTIVDAVVALRELPTQAHQGLAFEKLMVNFIKQDPTLSQQYDEVYRWGDWKYNGGK
ADTGIDLVARRREDGRWTAIQCKFYLPSTSLQKRHLDSFFEASGRSFLTEEGTDSFANRL
IISTTDKWSSNAEAMMDNQVIPTNRIGLGAIAESPINWDIAYPGSELTINLERKETFEPR
PHQETAISKAIEGFETHDRGKLIMACGTGKTFTALRLAERVAENNGGRARVLFLVPSIAL
LSQTLKEWTAQTQVDLRSYAVCSDTKVSRGAEDIASYDLEVPVSTNGKDIAERLGRSKRA
AGLTVVFSTYQSLPAIHEAQQQGLEDFDLVICDEAHRTTGVTLAGDDASHFVRIHDADYI
KAAKRLYMTATPRLFDDQIKGKAAEHSAELVSMDDEAIYGPEFHRLGFGEAVERGLLTDY
KVLVMTVDEQLASDTLARFTPQPGQELTLDLASAMIGTWNGLTKRSGREQGTKSGFEHGA
APMQRTVAFARDIKTSKQITDAFPTLIANHVDSLNEAAATNDVSLHNVNVSIAANHVDGT
MNAMQRESLLTWLEAPVPDTETRMLTNARCLSEGVDVPALDAVVFFNPRNSMVDVVQSVG
RVMRKAEGKDYGYIILPVAVPPGAEPSTVLNDNKRFRVVWQILNALRAHDDRFNAKINSI
ALNEGSPSDLPVIVEPVTPGPSDQPADERDNEVTQMVLFSLEAWQEALYTKLVDKVGTRT
YWEDWADDVADIAQAQITRITSLLDGADSTVMEEFERFVEGLRGNLNDSITRDEAVSMLS
QHLITSPVFDALFSEHEFASHNPVSKVMQRMVDVLDDSQLDAETEKLEKFYDSVRMRAAD
VTSASGKQTVIKELYERFFQKAFKKQSEALGIVYTPIEIVDFILRAANHVSRKHFGRGLT
DEDVHILDPFTGTGTFMVRLLQSGLITPEDLARKYASELHATEIMLLAYYVAAVNIETTY
HALLGEKALREDTEKPEYEPFEGIVLADTFQITEEEDKLDSEVFKQNNQRIKRQLDAKIN
VIVGNPPYSKGQTSANDLNANVKYPTLDKKIEETFAEKSTAQLKNSLYDSYLRAFRWATD
RIGNQGVVAFVSNGGWIDGNTADGVRLSLAEDYSDIYVFNLRGNQRTAGEQSRKEGGKVF
GSGSRNTVAIFIGVKQPGATGCAIHYRDIGDYLTAEEKLEIVDHSTMESIDWELITPNQY
GDWTNQRSEDFETWPSLFSKNNSSLGVFSLSSSGMATSRDAWVYNSSTPRLKESMSRFSE
TYREAEGEYSKNPNRSIIDWLKENPEFNQSDKIKWTDILHRHLKNGTKLESSDSFITVSL
YRPFFPQRLYRNPMLMHRQYQLPSMFPTLRHNNIGFYVVNPGSAKPFSALATNILPDLAM
WGSNAGLFFPRWTWEPVEAPEGELDFGSNSEVTAGAPGTAGEVLEGYRRVDNITDEIHAL
YREALGEDVTKDDIFYFVYGQLHDPGYREAYAADLKKMLPHIETPTDRARFDQLVKAGRE
LMELHIGYEDVEPWPLDIQLKAGVDPEDRESWRVSKLKWAKVRDPETKKLVNDVTTMVYN
PKVTIAGIPLDADEYMLGSRSALAWIIDRYQVKTDKASGIVNDPNDWADEVGNPRYIVDL
IGKVTRVAVETVRIVNSIDSRA
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatgtccaccattgttgatgctgttgttgctcttcgtgaacttcccacccag
gcccaccagggtctggcgttcgaaaagctcatggtcaacttcatcaagcaggaccccacc
ttgtcgcagcagtatgacgaggtctaccgatggggcgattggaagtacaacggaggcaag
gccgacaccggcatcgacctggtggcccgccggcgtgaggatggacgctggacggccatc
cagtgcaagttctacctcccctcgaccagcctgcagaaacgccacctcgactccttcttc
gaggcctcggggcgaagcttcctcaccgaagagggcaccgactcgttcgccaaccggttg
atcatctccaccaccgacaaatggtcgtcgaatgccgaggccatgatggacaaccaggtc
atccccaccaacaggattggtctaggagccatcgccgagtcccccatcaactgggacatc
gcctaccccggttccgagctgaccatcaacttagaacgcaaggaaacctttgagccccgc
ccgcaccaggagacggccatctccaaggcaatcgagggctttgagacccacgaccgaggc
aaactcatcatggcgtgtggtacggggaaaactttcactgcccttcgcctggctgaacgt
gtggctgagaacaatggtggccgggctcgcgtgctgtttctggtgccctcgattgctctg
ctgtctcagactctgaaggagtggaccgcgcagacccaggtggacttgcgctcctatgcg
gtgtgctccgacaccaaggtctcccggggtgcagaagacatcgcctcctatgacctggaa
gtgccggtctcgaccaacggcaaggacattgccgagcgtctcggacgcagcaaacgcgct
gcaggactgacagtagtgttctccacctaccagtccctaccagccatccacgaggcccag
cagcagggtctggaggactttgatctggtcatctgcgatgaagcgcaccgcaccaccggt
gtcaccctggcaggcgacgacgccagtcacttcgtgcgcatccacgacgccgattacatc
aaggccgccaagcggttgtacatgaccgccaccccgaggttgttcgacgatcagatcaag
ggcaaggccgccgagcactccgccgaactggtctccatggacgatgaggccatctacgga
ccggagttccaccgcctcggcttcggtgaggccgttgagcggggtctgctcaccgactac
aaggtcctggtcatgaccgtcgatgagcagttggcctctgacaccctggcccggttcacc
ccacaaccaggacaagagctgaccctcgatctggcctcagccatgattggtacctggaat
ggcctgaccaaacgctctggacgggagcagggcaccaagtctggtttcgaacacggtgct
gccccgatgcagcgcacggtggccttcgcacgagacatcaagacctccaagcagatcacc
gacgccttccccaccctcatcgccaaccacgtcgactccctgaacgaggcggccgccacc
aacgacgtctccctccacaacgtcaatgtctctatcgccgccaaccatgtcgacggcacc
atgaacgccatgcagcgcgaatccctgctcacctggttggaagccccggttccggacacc
gagacccgcatgctcaccaatgcccggtgcctgtcggagggtgtggacgtgccagccttg
gacgcggtggtcttcttcaacccccgtaactccatggtcgatgtcgtccagtctgtggga
cgggtgatgagaaaggccgagggcaaggactacggatacatcatcctgccggtggccgtc
ccacccggcgcggaaccctcgaccgtgctcaatgacaacaagcgcttccgggtggtgtgg
cagatcctcaatgctctgcgtgcccatgatgaccggttcaacgcgaagatcaactccatc
gccctcaatgagggcagtccgagcgatctccccgtcattgtcgagcccgtcactccaggc
ccgtctgaccaacccgccgacgagcgggacaacgaggtcacccagatggtgctgttttca
ctggaggcctggcaggaggcgctctacaccaagctggtcgacaaggtcggcacccgcacc
tactgggaggattgggctgatgatgtcgccgacatcgcccaggctcagatcacccgcata
acctccttgcttgatggcgcggattccaccgtgatggaggagttcgagcgcttcgtggag
gggctgcgtggcaatctcaatgactcgatcacccgggatgaggcggtgtcgatgctctcc
cagcatctgattacctctcccgtcttcgatgccttgttctctgagcacgagttcgcctcc
cacaacccggtctccaaggtcatgcagcgcatggtggacgtcctcgacgactcccagctg
gatgctgagacggagaagctggagaagttctacgactcggtacggatgcgcgctgccgac
gtcacctcagcctcgggcaagcagacggtgatcaaggaactctacgagcgcttcttccaa
aaagcgttcaagaagcagtccgaagccctgggcatcgtgtacaccccgatcgagattgtc
gacttcatcctccgagccgcaaaccatgtctcccggaaacactttggtcggggtctgaca
gacgaggacgtccatatccttgaccccttcaccggcaccggcaccttcatggttcggctc
ctccagtccgggttgatcacaccggaggacctggcccgtaagtacgcctccgagctgcat
gccactgagatcatgctgctggcctactacgtggcggccgtcaacatcgagaccacctac
cacgctctgctcggcgagaaggcccttcgagaggacacagaaaagccggaatatgagccc
tttgagggaatcgtgctggcggacaccttccagatcaccgaggaggaagacaagctcgat
tccgaggtgttcaagcagaacaaccagcgcattaagcgccagctcgacgccaagatcaat
gtcatcgtcggcaacccgccctactccaaagggcagaccagcgccaatgacctcaatgcc
aacgtcaagtatccgacgcttgataaaaaaattgaggagactttcgcggaaaaatctact
gcccagctaaagaactctctttacgactcctacctgcgtgccttccgctgggccactgac
cgtatcgggaaccagggtgtcgtcgcgttcgtgtccaacggtggatggatcgacggcaac
actgccgacggcgtccgcctgagcctggccgaggactactccgacatctacgtcttcaac
ctgcggggaaaccaacgtaccgccggggagcagtcccggaaggagggcggcaaggtgttc
ggttctgggagccggaacacggtcgccatcttcatcggagtcaaacaacccggcgcgaca
ggctgtgccatccattaccgcgacatcggcgactacctcactgctgaggagaagctggag
atcgttgaccacagcaccatggagagcattgactgggaattgatcacaccaaaccagtac
ggtgactggaccaatcagcggtccgaggacttcgaaacatggccatcgcttttcagcaaa
aacaactcatcactcggggtcttttcgctttcttctagtggcatggctacaagccgcgat
gcgtgggtgtacaactcctctactcctaggctaaaagagtcaatgtcaagattttccgag
acctaccgagaagcagaaggtgaatactcgaagaatccgaaccggtccataatcgactgg
cttaaggagaaccctgagttcaaccagtctgacaagattaaatggactgatatcttgcat
cggcatctcaagaatggcacgaaactggaatcgtcagattccttcatcacggtttccctg
tatcggccatttttcccccaacgcctttaccgaaatccaatgttgatgcacaggcaatat
cagctcccctcaatgttccctacccttcgccacaacaacatcgggttctatgtggtgaac
cctgggagcgcgaaaccattttcggctctggccacaaatatcctccccgatcttgccatg
tggggctcgaatgctggcctgttcttcccccgctggacttgggagcccgtcgaggcaccg
gagggtgaactggacttcggcagcaacagtgaggtcacagcaggcgcgccgggcactgct
ggcgaggtactcgaggggtaccgccgagtcgacaacatcaccgacgagatccatgccctc
tatcgggaggcactcggggaggatgtgaccaaggacgacatcttttacttcgtctatggc
cagctccatgaccccggctaccgggaggcctacgctgctgacctgaagaagatgttgccc
cacatcgagactccaactgaccgggcacgcttcgaccagctcgtcaaggccggcagggaa
ctcatggagctgcacatcggctatgaggacgtcgagccctggcctctggacatccagctc
aaggcaggtgttgacccggaggaccgggaaagctggagggtgagcaagctcaagtgggcg
aaggtgcgcgacccggagacaaagaagctcgtcaacgacgtcaccacgatggtctacaac
ccgaaggtcaccatcgccggcatccccctggatgcagacgagtacatgctcggatccagg
tcggctttggcctggatcatcgaccgctaccaggtgaagacggacaaagcctccggcatc
gtcaacgaccccaatgactgggcggatgaggtcggcaaccctcgctacatcgttgacctc
atcggcaaggtcacccgggtggccgtggagactgtccgcatcgtcaactccatcgacagc
agggcgtag
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