Corynebacterium occultum: COCCU_05700
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Entry
COCCU_05700 CDS
T07880
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cok
Corynebacterium occultum
Pathway
cok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCU_05700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cok03021
]
COCCU_05700
03019 Messenger RNA biogenesis [BR:
cok03019
]
COCCU_05700
Transcription machinery [BR:
cok03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
COCCU_05700
Messenger RNA biogenesis [BR:
cok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
COCCU_05700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
S1CSD-TOTE-2
NACHT
AAA
Motif
Other DBs
NCBI-ProteinID:
QGU07084
UniProt:
A0A6B8W0N8
LinkDB
All DBs
Position
1209374..1211623
Genome browser
AA seq
749 aa
AA seq
DB search
MTQTDSAAANAGGEQQNLTSLRLPELRKIAADKGLKGVSGLRKGDLITAIQTGSVPTAKK
EAAPTAIAEAPQAAAPQPEASQAETTRAEPAKASRRRVVKRTAPAQQETPVPEEAPTRAE
TAEAAAPQAETPRHETNRHSEPAREQHRHDDTEDSSDQDGSEGSADDDGRYESRSAARRA
RRNRARQSQRERSHHEPRDSRDDRDEQRGQQSEAQEDHESPARQDQQQEAEHSPEQQGNQ
RPQRGTRDFHRDSNREQGERREERSRDSRDSRNDRDEQRGQQQRNDRNDRDEHDEQRGQQ
QRNDRHDRNDRDEHDGDRRGRRNRRGRRTRNDRNDRDHRDHRNERDTQQHDDSQQHADNL
QDVAGILDILDQNTAFVRTTGYHASAADVFVPNQLIRKFGLRRGDAVTGQVKMSGAGNSH
QGGRGNRQKWNSLVRVDSANGLSLEEARKRPDFAKLTPLYPNQRLRLETDSKILTTRVID
LIMPIGKGQRALIVSPPKAGKTTIMQNIANAISTNNPECYLMVVLVDERPEEVTDMQRSV
NGEVIASTFDRPPGEHTAVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNSSPASGR
ILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAEL
KLDRKISERRVFPAVDVNPSGTRKDELLLQPDEARIMHKLRRILSALDNQQAIDLLIKQL
KKTKSNGEFLLQVASSAPMAADMEDEDYS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaaacggatagcgccgcggcaaacgccggcggcgagcagcagaacctgacctcc
ctccgactgcccgagttgcgcaagatcgctgcagacaagggactcaagggtgtgtcggga
ctgcgcaagggggatctgatcaccgcgatccaaaccggaagcgtacccaccgccaagaag
gaggctgcgccgaccgccattgcggaagcaccacaggcggcagcaccccagccggaggct
tcccaggcagaaaccaccagggctgagcctgccaaggccagccgccgtcgggtggtcaag
cgcaccgcccccgcccagcaggagaccccggtaccggaagaagcccccaccagggctgaa
accgccgaggcggcggcaccacaggcggaaactccccgccacgaaaccaaccgccacagc
gaacccgctcgtgagcagcaccgccacgacgacaccgaggacagttccgaccaggacggc
tccgagggttccgccgatgatgatggccgctacgagtcccgctctgcagcgcgccgggcg
cgccgcaaccgggcccgccagagtcagcgtgagcgcagccatcatgagccccgtgactcc
cgcgacgaccgtgatgagcagcgtggccagcagtctgaggcgcaggaggaccacgagtcc
ccggcgcggcaggatcagcagcaggaggccgagcactccccggagcagcagggcaaccag
cgtccgcagcgcggcacccgggacttccaccgggacagcaatcgcgagcagggggaacgt
cgtgaagaacgttcccgcgactcccgcgactcccgtaacgaccgcgatgagcagcgtggc
cagcagcagcgcaatgaccgtaacgaccgcgatgagcacgatgagcagcgtggccagcaa
cagcgcaatgaccgtcatgatcgcaatgaccgcgatgagcacgatggtgaccgtcgggga
cgtcgcaaccgtcggggacgtcgcacccgtaatgaccgtaatgaccgggaccaccgtgac
caccgcaatgagcgcgatacccagcagcacgatgattcgcagcagcacgcggataacctg
caggatgtcgccggtatcctggacatcctggatcagaacaccgcttttgtccgcaccacc
ggttatcacgcctctgcggctgatgtctttgtgccgaaccagctgatccggaagttcggg
ctgcgtcgcggtgacgccgtcaccgggcaggtcaagatgtccggtgccggcaacagccac
cagggtggccgtggcaaccgccagaagtggaacagcctggtccgggtggacagcgccaat
ggtctcagcctcgaggaggcccggaaacgaccggacttcgccaagctgaccccgctgtac
ccgaaccagcgtctgcgcctggagaccgactcgaagatcctgaccacccgcgtgatcgac
ctgatcatgccgatcggtaagggtcagcgtgcgctgatcgtctcgccgcccaaggccggt
aagaccacgatcatgcagaacatcgccaacgcgatctccaccaacaacccggagtgctac
ctcatggtggtcctggttgatgagcgtccggaggaggtcaccgacatgcagcgcagtgtc
aacggtgaggtcatcgcctccaccttcgaccgtcccccgggagagcacaccgccgtggct
gagctggccatcgagcgcgccaagcgcctggtggagcagggcaaggacgtggtggttctg
ctggactccatcacccgtctgggccgtgcctacaacaactcttccccggcttcgggacgc
atcctctccggtggtgtggactccaacgccctctacccgccgaagcgtttcctgggtgcc
gcccgcaacatcgagaacggtggctccctgacgatcatcgccaccgccatggtggagacc
ggttccgccggtgacaccgtgatcttcgaggagttcaagggcaccggcaacgccgagctg
aagctggaccgcaagatctccgagcgtcgggtattcccggccgtggatgtcaacccctcc
ggcacccgcaaggatgagctgctgctccagcccgatgaggctcgcatcatgcataagctg
cggcgtatcctgtcggcactggataatcagcaggccatcgatctgttgatcaagcagctg
aagaagaccaagtccaacggtgaattcctgctgcaggtcgcctcgagcgcaccgatggcc
gcggacatggaagatgaggactactcctag
DBGET
integrated database retrieval system