Corynebacterium occultum: COCCU_06440
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Entry
COCCU_06440 CDS
T07880
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cok
Corynebacterium occultum
Pathway
cok03030
DNA replication
cok03410
Base excision repair
cok03420
Nucleotide excision repair
cok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCCU_06440 (polA)
03410 Base excision repair
COCCU_06440 (polA)
03420 Nucleotide excision repair
COCCU_06440 (polA)
03440 Homologous recombination
COCCU_06440 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cok03032
]
COCCU_06440 (polA)
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_06440 (polA)
Enzymes [BR:
cok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCCU_06440 (polA)
DNA replication proteins [BR:
cok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
COCCU_06440 (polA)
DNA repair and recombination proteins [BR:
cok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
COCCU_06440 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COCCU_06440 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
QGU07226
UniProt:
A0A6B8W8I7
LinkDB
All DBs
Position
1359565..1362267
Genome browser
AA seq
900 aa
AA seq
DB search
MSENTDLNTTDSTGERPRLLLIDGHSMAFRAFFALPAENFSTTGGQHTNAVYGFLSMLAN
ILKEEQPSHVGIAFDVGRKTFRTDLFPAYKAQREATPEEFKGQVGLIKEVLESLGITTME
QENYEADDIIGTLVTQARSNYETVIVTGDRDYLQLVDENTTVLYPMRGVSTLHRFTPAAV
EEKYGLTPQQYPDFAALRGDPSDNLPGVPRVGEKTATKWILEYGSLDNLLDNADNIKGLA
GENLRERIDQVRMNRDLTAMVTDMDLPLGPDDLVPGEANVAAIAERFDELQFGTSLRERI
LASVNADNGAQVEPVPAAEVTIDTGSLAEWLTAREGQPLAMAVAGVGTPASGDADALALI
DVAHHAFAADLAEISPAEEKVLAQWLSSESPKILHEAKSVFHMLAGRGFELNGISHDTAI
AGYLLRPGQRTYELKDVYQRHLQRQLSDPEEAATGQLSLLDSGEASRALVDQALAILELA
EELTVLLQEIDSFELYADLELPLVGILARMEAAGIKVDVPTLEEQLESFVEQVAEEESAA
RELAGDPSLNLSSPKQLQVVLFETFGMPKTKKTKTGYSTAAKEIEALAVKHPHPFLDHLL
AHREYQKMKTTLEGLIKTVNGDGRIHTTFNQTVASTGRLSSTDPNLQNIPVRTPAGRKIR
SAFVVGEGYETLLTADYSQIEMRVMAHLSGDPGLVEAYQAGEDLHNYVGSKVFDVPIDGV
TPELRRRVKAMSYGLVYGLSAFGLSQQLNISPAEAKQTMESYFERFGGVKRYLAEVVDEA
RQVGYTSTLFGRRRYLPELTSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRELRK
AQVTSRVLLQVHDELVVEVSPGELEQVRGIVEKEMDSAITLAVPLEVSAGHGLNWDNAAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagaacaccgatctgaacacgactgacagcaccggcgagcggccgcgcctcctg
ctcatcgacggccattcgatggctttccgggcattcttcgcgctgccggccgagaacttc
tccacgaccggcgggcaacacaccaacgccgtctacggctttctctcgatgctggccaat
atcctcaaggaggagcagccgagccatgtcggcatcgccttcgacgtggggcggaagact
ttccgcaccgatcttttcccggcgtacaaggctcagcgtgaggccaccccggaggagttc
aaggggcaggtcggcctgatcaaggaggtgctggaatccctcggcatcaccaccatggag
caggaaaattatgaggccgatgacatcatcggcactctggtcacccaggcccgatccaac
tatgagacggtcatcgtcaccggtgaccgtgactacctgcagctggtcgatgagaacacc
accgtgctctacccgatgcgtggggtgtccaccctgcatcgcttcaccccggcggcagtg
gaggagaagtacggcctgaccccgcagcagtacccggatttcgcggccctgcggggcgat
ccctccgataacctgccaggtgttccccgcgttggtgagaagaccgccaccaagtggatt
ctggagtacggctccctggacaatctgctggataatgccgacaacatcaaggggttggca
ggtgagaacctcagggagcgaatcgaccaggttcggatgaaccgtgatctgacggccatg
gtcaccgacatggatctgccgctcgggccagatgatctggttccgggtgaggcgaatgtc
gccgctatcgccgagcgtttcgatgagctgcagttcggcaccagcctgcgggaacgcatc
ctcgcctccgtcaacgcggacaatggcgcccaggtcgagccggtcccagccgctgaggtc
accatcgacaccggttcgctggccgagtggctgactgcccgtgagggacagcccctggcc
atggcggttgctggtgtcggcacgcccgccagcggtgacgcggacgccctggcgcttatc
gacgtcgcgcaccacgccttcgccgccgatctcgccgagatcagcccggcggaggaaaag
gtcctggcacagtggttgagttccgaatccccgaagatcctgcacgaggccaagtccgtc
ttccacatgctcgccggccgtggtttcgaactgaacggcatcagccatgacaccgccatc
gccggttacctgttgcggcctggccagcgcacctatgaactcaaggatgtctaccagcgt
cacctccaacgccagctgtccgacccggaggaagccgccaccggacaactcagtctgttg
gacagcggggaagcctcccgcgccctggtcgatcaggccctggccatcctggagctggcg
gaggagctgactgtcctgctccaggagatcgacagtttcgagctctacgccgacctggaa
ctgcccctggtggggatcctggcacgcatggaggccgccggcatcaaggtggatgtgccc
accctggaggaacagctggaaagcttcgtggaacaggttgccgaggaagagtccgccgcc
cgggagctggccggtgaccccagcctcaacctctccagccccaagcagctgcaggttgtc
ctcttcgaaaccttcggcatgcccaaaaccaagaagacgaagaccggttactccaccgcg
gccaaggagattgaagctctcgcggtcaagcatccccaccccttccttgaccacctcctg
gcacatcgcgagtaccagaagatgaagaccaccctggaagggttgatcaagaccgtcaac
ggtgacgggcgaatccataccaccttcaaccagacggtggcctctacggggcgactctcc
tccacggacccgaacctgcagaacatcccggtacgtaccccggcgggccggaagatccgc
tccgccttcgtggtcggcgagggctatgaaaccctgctcaccgccgactactcccagatc
gagatgcgcgtgatggcacacctctccggcgacccggggctggtggaggcctaccaggcg
ggcgaggacctccacaattacgtcggctccaaggtcttcgacgtgcccatcgacggggtc
accccggaactgcgccgccgcgtgaaggccatgtcctatggcctggtttatggactctcc
gccttcggtctctcccaacagctcaatatctccccggcggaagccaagcagacgatggag
agctacttcgaacgcttcggtggggtcaaacgttacctcgccgaggtggtcgatgaagcc
cgccaggttggctacacctcaacgctcttcggacgtcgccgctaccttccggagctgacc
tccgataaccgcgtggcccgggagaatgccgaacgtgccgccctcaacgccccgattcag
ggtaccgcggctgacatcatcaaggtcgccatgatccgcgtggaccgtgaactgcgcaag
gcccaggtcacgtcccgggtgctgctccaggtccatgatgaactggtcgtagaggtctcc
ccgggtgagctggaacaggtccggggcatcgtggaaaaggagatggactccgcgatcact
ctggcggtgccgctcgaggtgtctgccgggcatggattgaactgggacaacgccgcgcac
tag
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