Corynebacterium occultum: COCCU_08080
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Entry
COCCU_08080 CDS
T07880
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cok
Corynebacterium occultum
Pathway
cok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
COCCU_08080 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_08080 (ruvB)
Enzymes [BR:
cok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCCU_08080 (ruvB)
DNA repair and recombination proteins [BR:
cok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
COCCU_08080 (ruvB)
RecFOR pathway proteins
COCCU_08080 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_14
Mg_chelatase
nSTAND3
RNA_helicase
AAA_3
IstB_IS21
Rad17
AAA_25
Zeta_toxin
Sigma54_activ_2
AAA_19
NTPase_1
AAA_18
TsaE
Resolvase
AAA_17
AAA_33
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QGU07549
UniProt:
A0A6B8VWT7
LinkDB
All DBs
Position
complement(1729723..1730796)
Genome browser
AA seq
357 aa
AA seq
DB search
MSDVEKTEFQLPPEYAGAGRAEDAPVNPQATPQEQDGESTLRPRSLVEFIGQPKVRGQLD
LVLTGAKRRGVTPDHVLLSGPPGLGKTTMAMIIAQEMGASLRMTSGPALERAGDLAAMLS
NLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLELPSFTLVGATT
RSGMLTGPLRDRFGFTAQMEFYDVEDLTRVVTRTAKILGISIEADAAVEIASRSRGTPRI
ANRLLRRVRDYAEVESDGVVDLAAAKEALRIFDVDEMGLDRLDRAVLTALIKGHGGGPVG
VNTLAVAVGEESATVEEVCEPYLVRAGMIARTGRGRVATAAAWRHLGLTPPEGSIGY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtggaaaagaccgagtttcagctgcctccggaatacgccggggcaggcagg
gcagaggatgcgcccgtcaacccacaggccaccccgcaggaacaggatggcgaatccacg
ctacggccccgcagcctggtggagttcatcggccagccgaaggtccgcggccagctggac
ctggtgctcaccggtgccaaacgtcggggggtgaccccggaccacgtgctcctttccggg
ccccctggtctgggtaaaaccaccatggcgatgatcatcgcccaggaaatgggtgccagc
ttgcgcatgacctccggaccggcactggaacgcgccggcgacctggcagccatgctctcc
aacctgatggaaggtgatgttctcttcattgatgagatccaccgcatcgcccgccccgcg
gaggagatgctctacatggcgatggaggatttccggattgacgtgatagtgggaaagggc
cccggtgccacctccatccccctggagctgccgtccttcaccctggttggcgcgaccacc
cgctccggcatgctcaccggtccgctgcgtgaccgcttcggcttcaccgcgcagatggag
ttctatgacgtggaggacctcacccgggtggtcaccagaactgcgaagatcctgggtatc
agcatcgaagcagatgccgccgtcgagatagcctcgcgttcccggggtaccccgcgaatt
gccaaccgcctactgcgccgcgtccgggactacgccgaggtggagtctgacggggtggtt
gatctcgccgccgccaaggaggccctgcgcatcttcgacgtggatgagatgggactggac
cgcctggaccgggcggtgctcaccgctctgatcaagggacacggtgggggaccggtgggg
gtgaacaccctcgccgtggcggtgggtgaggaatccgccaccgtggaggaagtctgcgaa
ccctatctggtccgtgccgggatgatcgcccgcaccggccggggccgggtggccaccgcc
gccgcctggcgccatcttgggctgaccccaccggaaggttcgatcggttactga
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