Corynebacterium occultum: COCCU_08650
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Entry
COCCU_08650 CDS
T07880
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cok
Corynebacterium occultum
Pathway
cok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCCU_08650 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cok03019
]
COCCU_08650 (pnp)
03016 Transfer RNA biogenesis [BR:
cok03016
]
COCCU_08650 (pnp)
Enzymes [BR:
cok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
COCCU_08650 (pnp)
Messenger RNA biogenesis [BR:
cok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
COCCU_08650 (pnp)
Transfer RNA biogenesis [BR:
cok03016
]
Prokaryotic type
tRNA degradation factors
COCCU_08650 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
KH_KhpA-B
MUG2_C
Motif
Other DBs
NCBI-ProteinID:
QGU07654
UniProt:
A0A6B8W2D3
LinkDB
All DBs
Position
complement(1838469..1840715)
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AA seq
748 aa
AA seq
DB search
MSNFEIHEDEDYGVTEAVVTIDNGDFGTRTIRFETGQLARQADGSVTTFLDDDTMLLSTT
TASNQPREGLDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLRPTFV
KGLRNEVQIVITVMSQNPNDYYDVVAINGASASTLLSGLPVSGPVGGVRMALIADEKHPE
GKWIAFPTHEQHDQSLFEMVVSGRLSTRQEGRKTVEDVAVMMVEAGATESVIKRVSEGAP
APTESVVAEGLEAAKPFIATLCHAQVALAERAAKETGTFQLFPAYSEDIFAAVEKQASAK
LAELLKIGGKQEREEATNVLMEQVEEALSASFADNGNAGKEIRAAFNALMKKLVRHMILT
ENFRIDGRGLSDIRDLGVEVELIPRAHGSALFERGETQILGVTTLDMLKMEQQIDSLSPQ
KSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALQPVIPSREEFPYTIRQVSEA
LGSNGSTSMGSVCASTLSLYNAGVPLRAAVAGIAMGLVSDEVDGETRYVALTDILGAEDA
FGDMDFKVAGTDSFITALQLDTKLDGIPSKVLVDALEQAREARMTILETMAEVIDGPDEM
NEHAPRITTVKIPVNKIGELIGPKGKTINSITEETGADISIEDDGTVYVSAASGSAAEAA
IEKVNAIANPQLPKVGERFLGTVVKTVPFGAFVSLLPGRDGLVHISNLGGGQRIEKVEDV
VNVGDKLQVEIADIDNRGKISLVPVAED
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattttgagattcacgaggatgaggattacggcgtcactgaggccgtagtaacc
atcgacaacggggacttcggtacccgcaccatccgtttcgagaccggccagctggcacgt
caggctgatggttccgtaaccaccttcctggacgatgacaccatgctgctgtcgaccact
accgcctccaaccagccccgcgagggcctggacttcttcccgctgaccgtggacgtggag
gagcggatgtatgccgctggccgtatccccggttccttcttccgtcgtgagggtcgcccc
tccaccgaggctattctcgcctgccgtctgatcgaccgcccgctgcgccccactttcgtc
aagggcctgcgcaatgaggtgcagatcgtcatcacagtgatgtcccagaacccgaatgac
tactacgatgtggtcgccatcaacggtgcttctgcctccaccctgctctccggcctgccg
gtttccggacctgtcggtggtgtgcgcatggcgctcatcgctgatgagaagcacccggaa
ggcaagtggatcgccttccccacccacgaacagcatgatcagtccctcttcgagatggtc
gtctccggccgcctgagcacccgccaggagggtcgtaagaccgtcgaagatgttgccgtc
atgatggttgaggccggtgccaccgagtccgtcatcaagcgtgtctctgagggtgctccg
gccccgaccgagtccgtcgtcgccgagggcctggaggcagcaaagcctttcatcgcaacc
ctctgccatgcgcaggtcgcactggcggagcgggcagccaaggaaaccggcaccttccag
cttttcccggcctacagcgaggacatcttcgcggctgtcgagaagcaggcctcggccaaa
ctggctgagctgctcaagatcggcggcaagcaggaacgtgaggaagccaccaacgttctc
atggagcaggtcgaggaggcgctgagcgcttccttcgctgacaatgggaacgccggcaag
gagatccgcgccgccttcaacgcactgatgaagaagctggtgcgccacatgatcctcacc
gagaacttccgcatcgacggtcgtggcctctctgatatccgtgacctgggtgtcgaggtc
gagctgatcccccgtgctcacggctccgccctcttcgagcgtggcgagacccagatcctc
ggcgtgaccaccctggacatgctcaagatggagcagcagattgattcgctgtccccgcag
aagtccaagcgctacatccatcactacaacttcccgccctactccaccggtgagaccggt
cgcgtcggctctccgaagcgccgcgagatcggccacggtgcgctcgctgagcgtgccctg
cagccggtgatcccctcccgcgaggagttcccgtacaccatccgccaggtgtctgaggcg
ctgggttccaacggctccacctccatgggttccgtctgtgcctcgacgttgtcgctgtac
aacgcaggtgtgccgctgcgtgccgcggttgccggtatcgccatgggcctggtctccgat
gaggtcgacggagaaacccgatacgtcgctctgaccgatattctcggtgccgaggatgct
ttcggtgacatggacttcaaggttgccggtaccgacagcttcatcaccgccctgcagctg
gacaccaagctggacggcatcccctccaaggtgcttgtcgatgccctcgagcaggcccgc
gaggcgcgcatgaccatcctggagaccatggctgaggtcatcgacggcccggatgagatg
aacgagcacgccccgcgcatcaccaccgtcaagatcccggtgaacaagatcggtgagttg
atcggccccaagggcaagaccatcaacagcatcaccgaggagaccggcgcggacatctcc
atcgaagatgacggcaccgtctacgtctccgctgcctccggctccgccgccgaggcagcc
atcgagaaggtcaacgccatcgccaacccgcagctgccgaaggtcggcgagcgcttcctg
ggtactgtcgtcaagaccgttcccttcggtgccttcgtctccctgctgccgggccgtgac
ggactggtccacatctccaacctcggtggcggtcagcgcatcgagaaggttgaggacgtg
gtcaacgtcggtgacaagctgcaggttgagatcgccgatatcgacaatcgcggcaagatc
tccctggtcccggttgcggaagattaa
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