Corynebacterium occultum: COCCU_08670
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Entry
COCCU_08670 CDS
T07880
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cok
Corynebacterium occultum
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cok03016
]
COCCU_08670 (truB)
Enzymes [BR:
cok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCCU_08670 (truB)
Transfer RNA biogenesis [BR:
cok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCCU_08670 (truB)
Prokaryotic type
COCCU_08670 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QGU07658
UniProt:
A0A6B8WMU6
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All DBs
Position
1843469..1844362
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AA seq
297 aa
AA seq
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MNDALSGSGLVIVDKPAGMTSHDVVSRLRRIFGTKKVGHAGTLDPMATGVLVLGIERGTR
FLAHLVTATKTYEATIRLGAATTTDDAEGEVLSSSPATDLNPEGISAGVEKLSGEIMQRP
ASVSAIKINGKRAHELVREGQQVEIPARPVTVHSFEILAQRQEGDFHDLDVRVHCSSGTY
IRSLARDLGEDLGVGGHLTALRRTELGPFTLDDALTLEQLAEDPRLSLSLDESLTRNFPV
LQVTTEEGEALAMGKWLAPRGLEGVHAAVTPEGKAVALIKEKGKRLSTVFVARPSTL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgcactatcgggttccggcctcgtgatcgttgataagccggccgggatgacc
tcacatgatgtggttagcaggctgcggcggattttcgggaccaaaaaagtcggtcatgcc
ggcaccctggatcccatggccaccggggtgctggtgctgggcatcgaacgtggcacccgt
tttctggcgcacctggtcaccgccaccaagacctatgaagccaccatccgcttgggcgcg
gccaccaccaccgatgatgctgagggagaggtgctcagcagctcccccgccaccgatctc
aacccggaggggatcagcgctggggtggaaaaactcagcggggagatcatgcaacgcccc
gcctcggtcagcgccatcaagatcaacggcaaacgcgcccacgagctggtccgggaagga
cagcaggtggagattccggcacgtccggtcaccgtccacagtttcgagatcctcgcccag
cgtcaggagggggacttccatgacctggatgtcagggtgcactgctcctccggcacctat
atccgttccctggcccgcgacctgggcgaggacctgggagtcggcgggcacctcacggcg
ttgcgtcgcaccgagttggggcccttcaccctggatgatgccctcaccctggagcagctg
gcggaagatccccgtctctccctgagcctggatgagtccctgacccgcaacttccccgtc
ctgcaggtcaccacagaggagggcgaggcactggcaatgggcaagtggctggcaccccgt
ggactggaaggcgtgcacgccgcagtcacccccgaaggtaaggccgtggccctgatcaag
gagaagggcaagcgactgtccacggtcttcgtcgcccgcccctccaccctctaa
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