Corynebacterium occultum: COCCU_09000
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Entry
COCCU_09000 CDS
T07880
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cok
Corynebacterium occultum
Pathway
cok02024
Quorum sensing
cok03060
Protein export
cok03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
COCCU_09000 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
COCCU_09000 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COCCU_09000 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cok02044
]
COCCU_09000 (ffh)
Enzymes [BR:
cok01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
COCCU_09000 (ffh)
Secretion system [BR:
cok02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
COCCU_09000 (ffh)
Eukaryotic Sec-SRP protein
COCCU_09000 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
APS_kinase
Zeta_toxin
AAA_16
MeaB
nSTAND3
AAA_18
NPHP3_N
MMR_HSR1
AAA_25
TsaE
NTPase_1
NB-ARC
AAA_33
Thymidylate_kin
SRPRB
MobB
AAA_30
ABC_tran
ArsA_ATPase
AAA_31
ResIII
ATP_bind_1
NACHT
AAA
AAA_5
6PF2K
AAA_14
AAA_28
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QGU07724
UniProt:
A0A6B8W2K5
LinkDB
All DBs
Position
complement(1918528..1920183)
Genome browser
AA seq
551 aa
AA seq
DB search
MFESLSDRLTGALKGLRGKGKLTEADISATAREIRLALLEADVSLSVVRGFIKRIKERAA
GVEVSEALNPAQQVIKIVNEELVEILGGETRRLQLAKNPPTVIMLAGLQGAGKTTLAGKL
AKHLTNQGHTPMLVACDLQRPGAVQQLQIVGERAGVPTFAPDPGTALGSADHEMGTSHGD
PVDVARRGIEEAKRLQHDVVIVDTAGRLGIDETLMTQARNIREAVNPDEVLFVIDAMIGQ
DAVTTAEAFREGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMYASTGEKLEDFDIFHP
ERMASRILGMGDVLSLIEQAEGVLDQKKAEETAAKLGSGELTLEDFLDQMLMIRRMGPVG
NLLKMLPGGKQMNQMADMVDEKQLDRIQAIIRGMTPAERDNPKVLNASRRKRIATGSGVT
VADVNQLVERFFEAKKMMGQMASQFGMGGPMRSATKKKPKGRKGKNGKRRPAKQTRGGGM
PGGGMPGMPGMPGGGMPGIPDMAQLQQLQKQMEAGDGGMPGLGGGMPGMPKLPKGMENID
LDNLDFGQDKK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagtctttgtccgatcggttgaccggcgccctcaaggggctgcgtggaaagggc
aaactgactgaggcggacatcagcgccaccgcccgggaaatccgccttgccctgctcgaa
gccgacgtctcgctcagcgtcgtccgcggcttcatcaagcgcatcaaggaacgcgccgcc
ggtgttgaggtctcggaggcgctgaacccggcgcagcaggtcatcaagatcgtcaacgag
gagctcgtggagatcctcggtggcgaaacccgccgcctgcagctggccaagaatccgccc
accgtcatcatgctcgccggtctccagggtgcaggtaagaccaccctggcgggtaagctg
gccaagcatctcaccaaccaggggcacacccccatgctggtggcctgtgatctgcagcgt
cccggcgcggtccagcagctccagatcgtcggtgagcgggccggtgtccccaccttcgcc
cccgatcccggcacggccctcggttccgcggatcatgagatgggcacctcccacggtgat
ccggttgatgtcgcccgccgcggcatcgaggaggccaagcggctgcagcatgatgtcgtc
atcgtcgataccgccggtcgtctcggcatcgatgaaaccctgatgacccaggcccgcaat
atccgtgaggccgtcaacccggatgaagtcctcttcgtcatcgatgcgatgatcggccag
gatgccgtcaccaccgctgaagctttccgcgagggtgtggacttcaccggtgttgtcctg
accaagctcgacggtgatgcccgtggtggtgccgcgctctccatccgtgaggtcaccggc
aagcccatcatgtacgcctccaccggtgagaagctggaagatttcgatatcttccacccg
gagcgcatggccagccggatcctcggcatgggcgatgttctctccctgatcgagcaggcc
gaaggggtcctcgaccagaagaaggcggaggagaccgccgccaagctgggtagcggtgag
ctcaccctggaggacttcctcgaccagatgctgatgatccgtcgcatgggcccggtgggc
aatctgctgaagatgctgcccggcggcaagcagatgaatcagatggccgacatggtcgat
gagaagcagctcgaccgcatccaggccatcatccgcggcatgaccccggcggaacgcgac
aaccccaaggtcctcaacgcctcccgtcgcaagcgcattgccaccggctccggtgtcacc
gtcgccgatgtcaatcagctggtggagcgcttcttcgaggcgaagaagatgatgggccag
atggccagccagttcggcatgggtggcccgatgcgtagcgccaccaagaagaagcccaag
ggacgtaagggcaagaacggaaagcgcaggcccgcaaaacagactcgtgggggcggcatg
cccggtggcggtatgccgggtatgccgggtatgccgggcggcgggatgccgggaataccg
gacatggcacaactgcagcagcttcagaaacagatggaagctggcgatggcgggatgccg
ggtctcggtggtgggatgccgggaatgccgaagttgcccaagggcatggagaatattgac
ctggacaacctggatttcgggcaagataagaagtag
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