Corynebacterium occultum: COCCU_09050
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Entry
COCCU_09050 CDS
T07880
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cok
Corynebacterium occultum
Pathway
cok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCCU_09050 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cok03400
]
COCCU_09050 (fpg1)
Enzymes [BR:
cok01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
COCCU_09050 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
COCCU_09050 (fpg1)
DNA repair and recombination proteins [BR:
cok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCCU_09050 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
A2L_zn_ribbon
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
QGU07734
UniProt:
A0A6B8W2L3
LinkDB
All DBs
Position
complement(1934123..1935061)
Genome browser
AA seq
312 aa
AA seq
DB search
MPELPEVEVVRRGLAEHVLGAEFTATEVLHPRANRGQEGSLPALLQNAVITGVGRRGKYL
WLNLGDSWDSEDAGNTGDAVAGGETRGVDKQPAEGGGHEGTALFVHLGMSGQMLVGEPGK
VTSPHLRIRSELRTPTGELLELAFVDQRTFGRWLHTETTPGGVPEPAAHVAMDPLEAGFD
PVATARKIRTKRSEIKRVLLDQTVVSGIGNIYADEALWAARVKPMRRASALRQRDVLNLL
VESRAVMERALAAGGTSFDSLYVNVNGASGYFSRSLNVYGQEGEPCPRCGTPIRRVMWTN
RSTHFCPECQVL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcccgaggtcgaggtggttcgccgtggcctggcggaacatgtgctgggg
gcggagttcaccgccactgaggtcctgcacccccgggcgaaccggggccaggagggatcc
ctgcccgcactgctccagaacgcggtgatcaccggggtgggacggcggggcaaatacctc
tggctcaacctgggcgattcctgggattccgaggatgccgggaatactggggatgctgtg
gcgggcggggaaacccgcggcgtcgataagcagccggctgaaggtggcggacatgaggga
acggctctttttgtgcacctcgggatgagtgggcagatgctggtgggcgaacccgggaag
gtgacctcaccgcacctacggatccgttccgagctgcgcacccccaccggggagctgctg
gagctggcctttgttgatcagcgtacttttggacgttggctgcacactgaaaccactccg
gggggtgtccctgagcccgcggcgcatgtcgcgatggatcccctggaggcgggttttgat
ccggtggccaccgcccggaagatccgtactaaacgttccgagatcaagcgggtgttgctg
gatcagaccgtggtgtccggtatcggcaatatctacgccgatgaggcactctgggcggcc
cgggtgaaaccgatgcgccgcgcctccgctctgcgacagcgtgatgtcctcaatctgctc
gtggagtcccgcgctgtgatggaacgtgccctggccgccggtggcaccagctttgactcc
ctctacgtcaacgtcaacggggccagcggttatttctcccgctccctcaatgtctacggc
caggagggagagccctgcccgcgctgcggcaccccgatccgccgggtgatgtggaccaac
cgttccactcatttctgcccggagtgtcaggtgctctga
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