Corynebacterium occultum: COCCU_10235
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Entry
COCCU_10235 CDS
T07880
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cok
Corynebacterium occultum
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cok03016
]
COCCU_10235
Enzymes [BR:
cok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
COCCU_10235
Transfer RNA biogenesis [BR:
cok03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
COCCU_10235
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGU07966
UniProt:
A0A6B8WAU7
LinkDB
All DBs
Position
complement(2193335..2193907)
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AA seq
190 aa
AA seq
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MRLFASISPSTQAREHLLGALRPISADLGPDLRWTDPQQWHLTLAFYGEQPEGAIEDLLG
HLAMAAAGARAMELNLRGAGSFNRRNLWVGVGGETPMLKQLMADCLLDPSERSRQRAHLT
VARNQRGRQRGWDPVLDDVVHALAVYQGPDFPVTQIDLVKSTLGAGRGGEPRYEVLASVP
LAAQHIDAGY
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttttcgcctcgatttccccctcgacccaggccagggagcacctgctcggtgcg
ctccgcccgatcagcgcggacctgggcccggatctcagatggacggacccgcagcagtgg
cacctgaccctcgccttctacggggagcaacctgaaggggcgatcgaggatctgctgggg
cacctggccatggctgccgccggggcccgggccatggagctcaacctcaggggggctggt
tccttcaaccggcggaatctctgggtgggggtcggcggggagactccgatgctcaagcag
ctgatggcggattgtctcctcgatccgagcgagcgttcccggcagcgcgcccatctcaca
gtggcccgtaatcagcggggcaggcagcggggctgggatccggtgctggatgatgtggtg
catgcgctcgccgtctatcaggggccggatttcccggtcactcagatcgacctggttaaa
tccaccctcggggcgggtcggggaggggaaccccgctatgaggtgcttgcgtcggtgccc
ttggcggcccagcacattgacgccggttactga
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