Corynebacterium occultum: COCCU_10990
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Entry
COCCU_10990 CDS
T07880
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cok
Corynebacterium occultum
Pathway
cok03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCCU_10990 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cok03019
]
COCCU_10990 (orn)
03009 Ribosome biogenesis [BR:
cok03009
]
COCCU_10990 (orn)
Messenger RNA biogenesis [BR:
cok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
COCCU_10990 (orn)
Ribosome biogenesis [BR:
cok03009
]
Eukaryotic type
Pre-60S particles
RNases
COCCU_10990 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7970
Motif
Other DBs
NCBI-ProteinID:
QGU08113
UniProt:
A0A6B8VVE4
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All DBs
Position
2368687..2369340
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AA seq
217 aa
AA seq
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MKMTETTPATTPAKNDRLAWIDLEMTGLDIHRHVIVEIAALITDADLNILGEGVDLVVHA
TEEELAEMDDFVTNMHNENGLAAQIRESSITMTEAEDAVLELIAEHCDPDRPAPLAGNSI
ATDRAFLREQMPRLDQALHYRMIDVSSIKELARRWYPKVYYNQPPKGLAHRALADIVESI
RELDYYRRSTFVPYPGPTSTEAHEAARAATASYQRFL
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgactgaaacaaccccggccaccactcccgccaagaatgaccgcctggcctgg
atcgacctggagatgaccggcctggacatccaccggcacgtgatcgtggagatcgccgcc
ctgatcaccgatgctgatctgaatattctcggcgaaggtgtggacctggtggtgcacgcg
accgaggaagagctggcggagatggatgacttcgtcaccaatatgcacaatgagaatggt
ctggcggcccagatccgcgagtccagcatcaccatgacagaggccgaggatgcggttctg
gaattgatcgccgagcactgcgatccagaccgccccgcccccctggccggcaactccatc
gccacggaccgcgccttcctccgggagcagatgccccgactggaccaggccctgcattac
cgcatgatcgacgtatcctccatcaaggagctggcacgccgctggtaccccaaggtgtac
tacaaccagcccccgaagggcctggcccaccgcgccctggccgatatcgtcgagtcgatc
cgcgagctggactattaccgccgcagcaccttcgtcccataccccggccccacctccacc
gaagcgcatgaggcagcccgggccgcaaccgcgtcctaccagcggtttttgtga
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