Corynebacterium occultum: COCCU_12000
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Entry
COCCU_12000 CDS
T07880
Symbol
lysU
Name
(GenBank) Lysine--tRNA ligase, heat inducible
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cok
Corynebacterium occultum
Pathway
cok00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cok00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCCU_12000 (lysU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cok01007
]
COCCU_12000 (lysU)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cok03016
]
COCCU_12000 (lysU)
Enzymes [BR:
cok01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
COCCU_12000 (lysU)
Amino acid related enzymes [BR:
cok01007
]
Aminoacyl-tRNA synthetase
Class II (A)
COCCU_12000 (lysU)
Transfer RNA biogenesis [BR:
cok03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COCCU_12000 (lysU)
Prokaryotic type
Other AARSs
COCCU_12000 (lysU)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF3085
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
QGU08300
UniProt:
A0A6B8WE80
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All DBs
Position
complement(2591127..2592710)
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AA seq
527 aa
AA seq
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MTNAKETQAQTNDLPEQLRIRREKRERLIEAGTEAYPVTVDRTISIAELREKFQVLAEGE
EAGNTEGVTYLTAGAETDVEHAIAGRLMFMRNTGKLCFATLQDGDGTQVQAMLSLAEVGE
ESLAAWKSDVDLGDFISVRGRVIASRRGELSIMATRWQMAAKALRPLPVAFAEMNEDTRV
RHRYTDLIMREEARKNALTRIKVMRALRNYLEGEDFLEIETPMLQTLHGGAAARPFETRS
NALDIDLYLRIAPELFLKRAVVGGIDRVFEVNRNFRNEGVDSTHSPEFAMLETYQAWGDY
RDGAKLIQGLVQSVAQEVFGSTTVTWADGTEFDLGGEWPVIEMYPSLNEALQQKFPGQPE
VTIDSTVEELKEIAQVIGLEVPEKGGWGHGKLVEEIWELLCEELLEGPIFVKDFPVETSP
LTRDHRSKPGVTEKWDLYVRGFELATGYSELVDPVIQRERFADQARLAAGGDDEAMVLDE
EFLAAMEQGMPPTSGNGMGIDRLLMALTGLGIRETVLFPMVKPEQKH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacgccaaggaaacccaagcccagaccaatgatcttcccgagcagctgcgtatc
cgccgtgagaagcgtgagcgactgatcgaggccggcacggaggcctacccggtcaccgtg
gaccgcaccatctcgatcgctgaactgcgggagaagttccaggtcctggccgagggcgaa
gaggccggcaacaccgagggggtcacctacctcaccgccggtgcagaaaccgatgtggag
cacgccatcgccggtcgtctgatgttcatgcgcaacaccggcaagctctgcttcgccacc
ctccaggatggtgacggcacccaggtgcaggccatgctttccctggccgaggtgggggag
gagtccctggctgcctggaagtcggatgtggatctgggtgacttcatctccgtccgcggc
cgcgtgatcgcctcccgccgtggtgagctctccatcatggccaccaggtggcagatggct
gccaaggcactgcgccccctgccggtggccttcgccgagatgaacgaggacacccgggtc
cgccaccgctacaccgacctcatcatgcgtgaggaggcccgcaagaacgccctgacccgc
atcaaggtgatgcgcgccctgcgcaactacctggagggtgaggacttcctggagatcgag
accccgatgctccagaccctgcacggtggtgcggcggcacgtcccttcgagacccgctcc
aacgccctggacattgacctctacctgcgtatcgccccggagctcttcctcaagcgcgcc
gtggtcggcggcatcgaccgcgtcttcgaggtcaaccgcaacttccgtaatgagggtgtg
gattccactcacagccctgagttcgcgatgctcgagacctaccaggcctggggtgactac
cgggatggcgcgaagctgatccagggtctggtccagtccgtggcccaggaagtcttcggc
tccaccaccgtcacctgggcggacggcaccgagttcgacctcggtggggaatggccggtc
atcgagatgtacccctccctcaatgaagcgctgcagcagaagttccccggccagccggag
gtcaccatcgactccaccgttgaggagctcaaggagatcgcccaggtcatcggcctggag
gtccccgagaagggtggctggggccacggcaagctggtggaggagatctgggagctgctc
tgtgaggagctgctcgaaggacccatctttgtcaaggacttcccggtggagacctccccg
ctaacccgtgaccaccgttccaagccgggcgtcaccgagaagtgggacctttacgtccgt
ggcttcgagctggccaccggttactccgagctggttgacccggtcatccagcgggagcgt
ttcgctgatcaggcccgcctggccgccggcggcgatgatgaggccatggtcctggatgag
gaattcctggccgccatggagcagggtatgccgccgacctccggcaatggcatgggcatt
gaccgcctgctgatggcactgaccggcctgggcatccgtgagaccgtcctgttccccatg
gtgaagccggagcagaagcactag
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