Corynebacterium occultum: COCCU_12695
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Entry
COCCU_12695 CDS
T07880
Symbol
rapA2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
cok
Corynebacterium occultum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
DEAD
DUF3670
SWIM
PLU-1
Motif
Other DBs
NCBI-ProteinID:
QGU08439
UniProt:
A0A6B8VZL9
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Position
complement(2769335..2772535)
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AA seq
1066 aa
AA seq
DB search
METQTFPAQALQFIQQYTSAAALKKGLELFRHKSVFLSGSPHLDGAMVFDFYVREVPGKN
RMVQTSVYVEDDGQLDSDCTCPDIPCAHEAAAILYLVNRGNLHIGKSADRHSRRPSWRRA
FDEVLPPIPEEEGGRENICLFFHTQRDQLGIRPGERGKTGWIKGKAKWDSLYNLECSTRT
RKLLEQLHQFSYQQTARHHYGYGWGGYQMEWLPLGELPTLQLGEILMELKYNGVAMLTWE
GRRPVELSPDLLRSRITVRQEKNGDLVLEPELCQDDTPILPREHHTQLLLGAPPTVLAEI
QYHNEKTQEIRLQRFVEPLSREFLMLHHQDEELRVGSAEVEDFEEEYLPRLQRLMSLESP
DDSYHAPQPRPAVLQIDATPLIQKPEGLQELRLQWSWDRGSWGKVDPEHESSVSRAVEAT
GATIANQVLEKHRAVPFLANVLPQLMELEHVRVNLTEETPKFRLAEETPQVTVGISAGET
DWFDLQVQVAVGGEKVEFSELFAALSQGQELFVLPSGTYFDLNIPELEQLRRIIEEAKTL
NDTTVDALKVSRYQVDLWQELVETGIVDAQEHEWWSRVQSLVQNPGRIETAAEIEVPAAV
HAELRDYQKTGYRWLETLRRNNLGGVLADDMGLGKTLQVIAMIAAATEEDPHGAPFLVVA
PTSVVGNWVREVQKFTPDLHALMIEGTEKKRGISLAEMLSSAADIRVVVTSYNLFRLEFE
AYAEQNWSAVIFDEAQMIKNHNSKAYKSARMLEAPFKLAVTGTPMENNLMELWSLVSLTS
PGLLGGKTHFTEFYRAPIEKEKDTGKLELLQRRMRPFLLRRTKELVAADLPEKTENVLEV
ELYPKHRRIYDRRLQRERQKVLGLVDDLDNNRFEVFRSLTLLRQLALDSELAAEESTPSA
KLDVLTELLSSAATEGHRVLVLSQFTRFLKKAREAANEADIESLYLDGKTRGRQKLIDDF
REGDSSVFFISLKAGGFGLNLTEADYVVLLDPWWNPATESQAVDRAHRIGQTRQVMVYRL
VAKDTIESKVMELKKTKAALFDLVLEGGGSVEADGLGIDEIRALME
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggagacacaaactttccccgctcaagccctgcaattcatccagcagtacacttccgct
gcggcgttgaagaaaggtttggagctattccgccataagtcggtgtttctcagtggtagc
cctcatttggacggtgccatggtctttgacttctatgtgcgggaggtaccgggaaagaac
cggatggtgcagaccagtgtgtacgtggaagatgatgggcagctcgacagtgactgcacc
tgccctgatatcccctgcgcccatgaagccgccgcgattctttatcttgtgaacagggga
aacctgcatatcgggaagtcggcagaccggcattcccggcggccgagctggcgtagagca
ttcgatgaggtgctgccgcccattccagaggaagagggaggccgggaaaatatctgtctc
ttttttcatactcagcgtgatcagttggggatccggccaggtgaacggggtaagacagga
tggatcaaagggaaagccaaatgggattccctctataatctggagtgcagcaccaggacg
cgaaaacttctggaacagctccatcagttcagctatcagcagaccgcgcgccaccactat
ggttatggctggggtggttatcagatggaatggctccccttgggagagctgcccaccctc
cagctgggggagatcctcatggagttgaaatacaacggggtggccatgctgacctgggag
ggcagacgcccagtggagctgagccctgacctactccggagccggatcacagtccggcag
gagaaaaacggtgatctcgtcctggagccggaactatgtcaggatgacaccccgatactt
ccccgggaacaccacacccagctcctgctcggtgcgcccccgacagtgctcgctgaaatc
cagtaccacaatgagaaaacccaggagatccggctgcaacgttttgtcgaacctttgagc
cgggagttcctgatgctccaccatcaggatgaggaactgcgagtgggttctgctgaagtg
gaggacttcgaggaggagtacctgccccggctgcagcggctgatgagtctggagtcccct
gatgactcttatcacgcacctcaaccacgcccggccgtcctccagatcgatgccacaccg
ctgatacagaagccggagggactccaggagctgcgattgcagtggtcctgggatcgtggg
tcgtggggaaaggtggaccctgagcatgagtcttccgtgagcagggcagtagaggccact
ggcgccaccattgcgaaccaggttctggagaagcaccgcgcggtacccttcctggcgaat
gttctgccgcagctgatggaattggagcacgtcagggtcaacttgactgaggaaacgccg
aagttccgcctggccgaagaaaccccacaggtgacagtgggaatcagcgccggtgaaacc
gactggtttgacctgcaggtacaggtggcggtcggcggtgaaaaagtggagttcagtgaa
ctgtttgcagcgctcagccaggggcaggaactgttcgtgctgccctcaggcacctacttc
gacctgaacatcccggaacttgagcagctgcggcgcatcatcgaggaagccaagactctc
aacgacaccaccgtggacgcactgaaggtcagccgctatcaggtggatctctggcaggaa
ctggtggagaccggcatcgttgacgcccaggaacatgagtggtggtcccgggtgcaaagc
ctggtacagaacccgggacgcatcgagacggctgcggagattgaggttcccgctgcggtg
catgccgaactgcgcgattatcagaaaacagggtatcgctggttggagaccttaagacgt
aataatctcggtggggtgctggccgatgacatggggctgggcaagacgctgcaggtcatc
gccatgatcgcggccgccaccgaggaggatccacacggtgctcccttcttggtcgtcgcc
cccaccagcgtggtgggtaactgggtccgcgaggtgcagaagttcaccccggatctccat
gccctgatgattgaggggacggagaagaagcggggcatctccctggcggagatgctcagc
agtgccgcagatatccgggtggtggtcaccagttacaacctcttccgacttgaattcgag
gcctatgccgagcagaactggtctgcggtgatcttcgacgaggcgcagatgatcaagaac
cacaactccaaggcgtataagagcgcccggatgctggaggcaccgttcaagttggctgtc
accggcaccccgatggagaataacctcatggagctgtggtccctggtgtcattgaccagc
cccgggctgctcggcggcaagacccatttcactgagttctaccgcgctcccatcgagaag
gagaaggacaccgggaagctcgagctgctgcagcgcaggatgcggcccttcctgctccgg
cgcaccaaggaactggtggcggcagatctgccggagaagaccgagaatgtcctggaggtg
gagctctatccgaagcaccgacggatctatgaccgccggctccagcgagaacgccagaag
gtgctcggtctggttgatgatctggacaacaaccgctttgaggtgttccgttccctgact
ctgctgcgtcaacttgccctggacagtgagttggccgcggaggagagtacgccttcagcc
aagttggatgtcctgacggagctgctcagctcggcggccaccgaggggcaccgggtgctg
gtactcagccagttcacccgctttctgaaaaaagcccgagaggctgccaacgaggctgac
attgagagtctctacctggacggcaagaccagaggcaggcagaagctgatcgatgacttc
cgggagggtgactcctccgtgttcttcatctccctcaaggcaggcggcttcggcttgaac
ctgaccgaggcggattatgtggtcctgctcgacccctggtggaacccggcgacggagtct
caggccgtggatcgggcacaccggatcggccagactcggcaggtgatggtctaccgcctg
gtggccaaggacaccatcgaatccaaggtcatggaactcaagaaaaccaaggcagccctc
ttcgatctggtcctggaaggcggtggcagcgtcgaagcagatggcttgggaatcgatgag
ataagggcactgatggagtag
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