Capnocytophaga sp. oral taxon 323: AM608_00095
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Entry
AM608_00095 CDS
T04076
Name
(GenBank) ATP-dependent exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
col
Capnocytophaga sp. oral taxon 323
Brite
KEGG Orthology (KO) [BR:
col00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_00095
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AM608_00095
Archaeal homologous recombinant proteins
AM608_00095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
ABC_tran
FtsK_SpoIIIE
RVT_3
Motif
Other DBs
NCBI-ProteinID:
ALC96165
UniProt:
A0A0M4GZP0
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All DBs
Position
14983..18531
Genome browser
AA seq
1182 aa
AA seq
DB search
MKILSVSLHNIASIEGPFTLNLEAEPLKSVGLFAITGATGAGKSTILDAICLALYNDTPR
LATTKNSVAIADGSAEVQVNNVKNLLRKGAISGYAKVVFQAVDGKTYEAEWQVRRAYNKL
SGAIQPETLQLTCLTDNQLIAENRKTLVLEKIKECVGLTFDEFTKSVILAQGDFTSFLKA
NDDKRSDILEKLTGTEIYTRISKQVYELNKQHKNELQLLEKQLENIVFLTEEERSALTEQ
LTADEERLKTLQASLATLKEQQQWFDNQKLYTQQWQEAIANKEKAEQEKTSQAERFGELA
IIEQLQAIKGDILTEQREKELLATAQQHLKEATTEKERLTADKAKVSEQKSLTENDLATT
KKAYETAKPAIAKAKELDVRLAELTQIFEQKQQQQEAKKSALQAKKESLEKVTEHIQKGE
RYIQQEEQWLNTHPDEAQLYRNALWLKQLVEEQQQLNEKLTAHSQAEERLRQQLNELKAQ
YPIQALPSTDIETLAKQQKAYLTALQVYQADREIAKHIKQYTDAKVQGEALLQEMQNTQN
QILETLQRLKTEKIATQIACDTAERIYQRAQIENTKDVAFLREHLVEGEACPVCGSVHHP
NAHKAVAEHLIDTVQEEFLTAKKQLETLTKEVITKETELKELQKRIESQTTENAERTDLW
QQESERLSQSVYYTTYPSVKIEEYITDKIAKTEHLLAENERLFEVLNRLKSLTDELNTLV
KDAENYEQQRQKYSQQLQSLQLSDAWLTLWETDIVQFQTQIITAKTDWEAHSACIEKYKK
RLAELTQERTELASSQQVLRQELTELTVAIDKDQAQLQTLKEERAGLLEGKSVQVIEESY
QQQLERLTTLLEQTQQQYNAILLEITANEKTLEALAMQQQQSQAHIAEATHKIEEWLTAY
KPAQIEHIRRKMQEWANRSHEWLQSERQALQSLNDRIAQYNTIANEKQQALETLKEKRPL
NFTEEDIVQQLAEQTAEEDTLRDTVVTQKSRLLNDEQQRAIAVELHTAKEEKEKLAHRWS
LLNDLIGSSTGNAFRKYAQEYTLDMLLQYANVQMRYLNRRYTLQRIPNSLSLQVIDNDMG
AEVRSVYSLSGGESFLVSLALALALSSLSSTKMNVETLFIDEGFGSLDSETLSVALDALE
SLQNQGKKVGVISHVQEMVERIAVKVVVQKEGNGKSKIVVSN
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactttcggtctctcttcataatatcgcttctatagaaggtccctttacgctt
aatttggaagctgaaccccttaaatcggtggggttatttgctattacaggagcgacaggg
gcaggcaaatctaccattttagatgctatttgccttgcgctttacaacgatacccctcgc
ttggcaactacaaaaaactcggttgctattgctgacggctcggctgaggtgcaggtgaat
aatgtgaagaacctcttgcgcaaaggggcgatttcgggctatgccaaagtggtatttcag
gcggtagacggcaagacttatgaagcggaatggcaggtacgcagagcctataacaaactt
tcgggggcaattcagcctgaaactttacaacttacttgcctaacggataaccaactgatt
gctgagaaccgcaagacattggtgctcgaaaagataaaggaatgcgtaggcttgactttt
gacgagtttaccaaatcggtgattttggcacaaggagactttacgtcgttcttaaaagcg
aatgatgataagcggtcggatattttagaaaaactcacaggtacggagatttacacacgc
atttctaagcaagtgtacgaactcaacaagcaacataaaaacgaactccaacttttagaa
aaacagctcgaaaacattgtttttttaacggaagaagagcgcagtgccttaaccgagcaa
cttacagccgatgaagagaggttaaaaaccttacaagcctcgctcgctactttaaaagaa
caacaacagtggtttgacaatcagaagttgtacactcagcaatggcaagaggctattgcc
aataaagaaaaagccgaacaagagaaaacctcgcaagcggaacgttttggagagcttgct
atcatagagcaattacaagccataaaaggggatatcctcaccgagcaaagggaaaaagaa
ctattagcaaccgctcagcaacatttgaaggaagctactaccgaaaaagaacggctcaca
gctgataaagctaaagtatccgagcaaaaatcgctaaccgaaaacgatttggctactacc
aaaaaggcttatgaaactgccaaacctgctattgccaaagcaaaggaattggacgtacga
cttgcagaactaacgcagatttttgagcaaaagcagcagcaacaagaggcaaaaaagagt
gctttgcaagctaaaaaagagtcgcttgaaaaagtaactgaacatatacagaaaggggag
aggtacattcagcaagaagagcagtggctcaacactcaccctgatgaagcgcagttgtac
cgcaatgcgttgtggctcaaacagcttgtggaagaacagcaacaactcaatgaaaaacta
actgcccatagccaagcagaagaacgccttagacaacaactcaatgagctgaaagcacaa
taccctatacaggcactcccctcaactgatatagagacgcttgccaaacagcagaaggct
tatctcaccgccttgcaagtatatcaggcggatagagagattgccaaacatatcaagcaa
tatactgacgcaaaggttcagggagaagcgcttttacaagagatgcaaaacacccaaaac
caaatattggaaacattgcaacgtttaaaaacagagaagatagccacccaaatagcttgt
gatacagcggaacgcatttaccaaagggcacaaatagaaaataccaaagatgtagcgttt
ttgagagaacatttggtggaaggagaagcctgccccgtatgtggttcggtacaccacccc
aatgctcataaagcagtagctgaacacctgatagatacagtgcaagaagaatttctaaca
gctaaaaaacaattagaaacgcttaccaaagaggttatcaccaaagaaacggagctcaaa
gaactgcaaaaacgtatagagagtcagacaacagaaaacgcagagcgtacggatttatgg
caacaagagagcgaacgcttgtcgcaatcagtgtattatacgacctatccttctgtgaaa
atagaagaatatatcacggataagatagcaaaaacagaacatcttttagcggaaaacgag
cgtctttttgaagtcctcaaccgactcaaatcgcttactgatgagctgaatacccttgtg
aaagacgctgaaaattacgagcaacaacggcaaaaatacagtcagcaattacagagctta
caactttcggacgcttggcttaccctttgggaaaccgatattgtgcaatttcaaacccaa
attatcactgctaaaaccgactgggaagcgcattcggcttgtatcgagaaatacaaaaag
cgccttgctgaactcacccaagagcgcactgagctcgcctcctcacaacaagtactccgt
caagagctcaccgaattgacagtggcaatcgataaagaccaagcgcaattgcaaacgctg
aaagaagaacgtgcgggattgttagaaggaaaatcggttcaagtaatagaagagagttac
caacagcagttagagcgattaacaactcttttagagcaaacgcaacagcaatacaacgct
attttattggagataacggctaatgaaaaaaccttagaggccttagcgatgcaacaacag
caatcgcaagctcatatagccgaagcaactcacaaaatagaagaatggcttacagcctac
aagcctgctcaaatagagcatataagaaggaaaatgcaagagtgggcgaatcgttctcac
gaatggctacaatcagagcgccaagcccttcaatcgttaaatgaccgcattgcacaatac
aataccattgcgaatgaaaaacagcaagcgcttgaaacactaaaagaaaaaagaccactc
aactttacagaagaagatatcgttcagcagttggcagaacagacagcagaagaagatact
ttgcgcgatacggtagtcactcaaaagagtcggcttttaaatgatgagcaacagcgagca
atagcagttgagttgcacacagccaaagaagaaaaggaaaaactcgctcatcgttggagc
ttgctcaacgacctgataggaagtagtacaggtaatgcgtttcgcaaatacgcacaggag
tacactttggatatgctcttgcaatatgctaatgtgcagatgcgctacctcaataggcgc
tacaccctgcaacgcattcctaactctcttagtctgcaagtgatagacaacgatatggga
gcagaagtgcgctcggtatactcactttcaggaggagaatcgtttttggtatccttggct
ttagctttggcactttcgtctctttcatctaccaaaatgaacgtagaaaccctctttata
gacgaaggttttggttctttagactctgagacactttcagtagccttagatgccttagag
agtttgcaaaatcaagggaagaaagtgggagttatctctcacgtacaggagatggtagag
cgtattgctgtgaaagtagtggtacagaaggaaggtaatggaaagagtaagatagtggtt
agtaattga
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