Capnocytophaga sp. oral taxon 323: AM608_02710
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Entry
AM608_02710 CDS
T04076
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
col
Capnocytophaga sp. oral taxon 323
Pathway
col03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
col00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AM608_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_02710
Enzymes [BR:
col01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM608_02710
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AM608_02710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
WHD_PriA_bact
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
TrmB
HTH_65
EXO84_helical
CjCas9_WED-like
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ALC96634
LinkDB
All DBs
Position
612033..614486
Genome browser
AA seq
817 aa
AA seq
DB search
MYFVDVILPLPLSKLFTYRINEDEAHFLQMGMRVAVPFGKSKVYTAIVHHIHTVEPSYDT
KDIEYILDETPIVTPQQIEHWQWIADFYMCTLGEVLKSALPSAFLLESETIIEIAEKELS
STLFTDDEWQVYEALHYKTALKGSEVSKIIPKNKALKVMKSLVEKGAARISERIFEKYVP
KLIKYIRLSSEYQTEEGLQRALEFLKRSEKQKKLIMAYFNYINREILPLKAEKLLEEASV
STTVLKSVIEKGIFEEYYLQKDRVSFADSDVSTKKILNKVQEEALHQIQKQFQTKNTVLL
QGVTASGKTEIYIELIDQYLKAGKQVLYLLPEIGLTVHLINRFKNHFGKSLSVYHSKYST
NERVEVWNNVLNNNPKAQLVVGVRSSVYLPFKQLGLVIIDEEHDNSYRQFEPAPRMQARD
TAIMLANIFKAKTLLGSATPSLESMHNVKTEKYGFVYLSKRYADFLPPIIELIDIKDKHH
RKRMNGHFSDILIKEITNTLSQGRQVLLFQNRRGFAPIVQCMQCGTVPQCPHCDVSLTFH
QSSNQLRCHYCGYAIPMPKACIACGSVDLRTKGFGTEQISKELEVLFPKIAIDRMDQDTT
NGKYGYEKILSKFEQQETQILVGTQMITKGLDFENIGLVGVMNADALIHSPDYRAYERSF
QLLLQVSGRAGRSAQQGKVLIQTYNPQHPVIQQVLQNDFRGMYQSQIEERQSFLYPPFVQ
MIKITFKHSNFNQVNESAEWFANTLREVFASQRGIDVLGPEFPPISRIRNEYLKDVLVKV
HPSEVSLRHTKEHIKRIENSFQAISNFRAIRVSYLVE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgtagatgtaattttgccgcttccgctttctaaactttttacctatcgtatt
aatgaagacgaagcacatttcttacaaatgggaatgcgcgtggctgttccattcggtaaa
tccaaagtatacacggctatagtacatcatatacatactgttgagccttcttatgacact
aaagacattgaatatatcttagatgaaacgcctatcgttactccccagcaaatagaacat
tggcaatggatagccgatttctatatgtgcactttaggggaagtactaaaatcagccttg
ccatcggcttttttattagaaagtgaaacaataattgaaattgcagaaaaagaactaagt
tcaacactctttaccgatgacgagtggcaggtatacgaagccttacattacaaaacagcc
ctcaaaggtagtgaggtgagcaagataatccccaaaaacaaggctctgaaagtgatgaag
agcttggtagagaaaggagctgctcgcatttccgaaagaatatttgagaaatatgtacca
aaactcatcaaatacattcgtttatcttctgaatatcaaaccgaagaaggcttgcaaaga
gccttagaatttttgaagcggtcggaaaagcaaaagaagttgataatggcttattttaat
tatatcaacagagaaatattgcctttaaaagcagaaaaattattagaagaagccagtgta
tcgacaacagtactaaaatcagtaatagaaaaaggcatttttgaagaatactacttacag
aaagaccgcgttagctttgctgatagtgatgtttcgacaaaaaagatactcaataaggta
caagaagaagctcttcatcaaattcagaaacagtttcagactaaaaacacagttctttta
caaggggttaccgcctctgggaagactgaaatttacattgaacttatcgaccaatattta
aaggcagggaaacaggtactctatcttcttcctgaaatcggcttgacggttcatcttatc
aaccgattcaagaatcactttggcaagagcctctcagtatatcattctaaatatagtaca
aacgaacgggtggaagtttggaataatgtactaaataataatcccaaagcgcaattggtt
gtaggtgttcgctcatcagtttacttgcctttcaaacaattagggcttgtaatcattgat
gaggagcacgataattcttacagacagtttgaaccagctcctcgaatgcaagcacgggat
actgctattatgttggcaaacattttcaaagctaaaactttgctgggttcggcaacgcct
tcgttggagagtatgcataacgtgaagactgaaaagtacggatttgtatacttatcaaaa
cgctacgcagatttccttcctcctattatcgagcttatcgatattaaggataagcaccat
cgcaaacgtatgaacgggcatttttccgacattctgataaaggaaattacgaatacttta
tcgcaagggagacaggtacttctctttcaaaacagaagaggttttgcccctatcgtgcag
tgtatgcaatgtggcacggtgccccaatgtccgcattgcgatgtaagtcttacttttcat
caaagcagtaatcagttgcgatgccattattgcggttatgcgattcctatgcccaaagcc
tgtatagcttgcggaagtgttgatttaagaacaaaaggcttcggaacagagcaaattagt
aaagaattagaagtgcttttcccgaaaatagctatagacagaatggatcaggatactact
aatggtaaatacggatatgaaaaaatattatcgaagttcgagcaacaagaaacgcaaata
ttagtaggcacccaaatgatcacgaagggattagattttgaaaatataggtctagtaggc
gtaatgaatgccgatgctctcattcattctcctgactaccgagcctacgaaaggagtttt
cagctattattgcaagtatcagggcgtgcgggaagaagtgcccaacaaggaaaagtattg
atacaaacctataacccacagcaccccgtaattcagcaagtattacaaaatgatttcaga
ggaatgtatcaaagtcagatagaggaacgccaatcctttttataccccccttttgtacaa
atgataaaaataactttcaaacacagtaattttaaccaagtaaatgaaagtgctgagtgg
tttgctaatacacttcgtgaagtttttgcttctcaaagagggatagacgtcttaggtcct
gaattccctcctatttcgcgtattagaaatgaatatctgaaagatgttttggtgaaagta
cacccctccgaagtctctttacgtcacactaaagagcatatcaagcgtattgaaaacagt
tttcaagctatcagcaactttcgtgctattcgggtaagttatttggtggaataa
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