Capnocytophaga sp. oral taxon 323: AM608_02885
Help
Entry
AM608_02885 CDS
T04076
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
col
Capnocytophaga sp. oral taxon 323
Pathway
col03420
Nucleotide excision repair
col03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
col00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AM608_02885
03430 Mismatch repair
AM608_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_02885
Enzymes [BR:
col01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AM608_02885
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AM608_02885
MMR (mismatch excision repair)
Other MMR factors
AM608_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALC96668
UniProt:
A0A0M4GLP7
LinkDB
All DBs
Position
657279..659648
Genome browser
AA seq
789 aa
AA seq
DB search
MDTFLKELESLNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMREGVDAFNILAL
TFTNKAANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDS
QRLINGIIKEMELDKDIYKYKRIQSRISSFKNSLITVRAYFNNPELMEADAMARQPRLGE
IYQEYVDRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYLI
VKALADRFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVEA
ANSVIEHNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQYQLPNGNFA
VLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRII
NFPARGIGETTMEKLTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNFQ
ALNQKANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVADS
RASLSEYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSIQ
SRNDLEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPS
ISNPNYRYKPLIDRDIFGEVDKSKLRLQKPISGIPPHKNAPTGEEQQKLRKLKPVNALYN
SNSNNKNTYNGLDIGTVVYHERFGRGKVISLEGTGNDKKAQINFETGGLKNILLRFAKLT
IIDSLNEDL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatacatttttaaaggaattagaaagtctaaatgctcctcaacgtgctgccgtgctt
caaaaagatggacctatcatcgtgatagcaggagcaggctctggtaaaactcgcgtgctt
acttatcgcatagccaacttgatgcgagaaggagtagatgctttcaatatccttgctctt
acctttactaataaggctgccaacgaaatgaaaaagcgtattgctagtcttgtaggcaac
aacgaagcaaagaacctatggatgggtacattccactctgtttttgccaaaatcttgcgc
atcgaagccgataaattgggatatcctcaaaattttactatatatgacactcaagactct
cagcgccttattaatggcatcattaaggagatggagttggacaaggatatctataagtat
aaacgaatacaatcgcgtatttcttcctttaaaaacagtcttattaccgtgagagcctat
tttaataatcctgaactgatggaagctgacgcaatggcaagacaaccacgtttaggagaa
atttatcaagaatatgtagataggtgttttaaagcaggagcaatggattttgacgattta
ttgctgaaaacaaatgaactcctcaatctatatcctgatgtattggcaaaatatcaaaat
aggtttaggtatattcttgtagatgagtatcaagataccaatcactctcaatatcttatc
gtgaaggctttggctgaccgttttcataacatttgtgtagtaggagatgatgcgcaaagt
atttatgcttttaggggagcaaacatcaataatattctcaatttcaaaaatgattatcca
gaggcaaaagaatataagttagagcaaaattaccgttctacaaaaaacattgtggaagca
gctaatagcgtgatagaacacaataaaatacgattggaaaaggtagttttcaccgaaaat
gaattaggtgaacctattaaagtgcatagaagtcctactgatgctgatgaaggtcgtttt
gtagcgagctctatctttgaaaacaagatgcaataccagcttcctaatggtaattttgcg
gtgctttatcgcactaactcacaatcgcgtgctattgaagatgctcttagaaaacgtgat
attccatatcgcatctatggcggattgtcattctaccaacgcaaggaaatcaaagatatg
cttgcttatttaagacttatcatcaatccaaatgatgaggaagctttggtgcgtattatc
aattttcctgcacgaggcattggagaaactacaatggaaaagcttactttggcagcaaat
cattataagaagtctatcttcgagataatgtataacatcaataaacttccagaattgcac
atcaacactactacaaagcaaaaacttactgattttgtggtaatgattcttaactttcaa
gcactcaatcaaaaagcaaatgcttttgaagttgccgaacaagtcgcaaagaaaacaggg
cttttgcaagagtttaaaaaagatggtacccccgagggtatagccaaaatggaaaacatc
gaagagatgcttaatggtatgaaagattttgtagaaggacaagaagatgtggcagatagc
agggcaagtctttcagaatatttagaagatgttgctttggctactgatatggataaagag
ataggcgatgatgaccgtgtagctttgatgactattcacttggcaaaaggattggagttt
ccgtatgtatacgtggtaggaatggaagaagatttgtttccttcggcaatgagcatacaa
tcacgtaatgatttggaagaagaaagaaggttattttatgtagcactcacccgtgctgag
aaacaagcctatttaacttatgcagaaaaccgttatcgttggggaaaactttctgatgcc
gagccaagtagatttatcgaagaaatagatgaacgttatctgcagtatcttaccccttct
atttctaatcctaattatcgttataaaccacttattgatagggatatttttggtgaagta
gataaaagtaaactacgtttgcagaaacctataagtggaatacctcctcataaaaacgct
ccaacaggagaagaacaacaaaaactcaggaagttaaaacctgtgaatgctttgtataat
tctaatagtaataataaaaatacttataacggactggatataggaacagtagtttatcac
gaacgtttcggtcgtggtaaagtaatttcattggaaggaacaggaaatgataaaaaggcg
caaataaatttcgagacaggaggtttaaaaaatatattattacgctttgctaaactaact
attattgatagtttgaacgaagatttataa
DBGET
integrated database retrieval system
