Capnocytophaga sp. oral taxon 323: AM608_03970
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Entry
AM608_03970 CDS
T04076
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
col
Capnocytophaga sp. oral taxon 323
Pathway
col03030
DNA replication
col03430
Mismatch repair
col03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
col00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AM608_03970
03430 Mismatch repair
AM608_03970
03440 Homologous recombination
AM608_03970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
col03032
]
AM608_03970
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_03970
Enzymes [BR:
col01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AM608_03970
DNA replication proteins [BR:
col03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AM608_03970
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AM608_03970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
GIY-YIG
RRM_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
ALC96858
UniProt:
A0A0M4H1K8
LinkDB
All DBs
Position
900875..902203
Genome browser
AA seq
442 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITDIAIYQFNGHEITDQFISLINPERPIQEFVTKLTGINNKM
LRNAPKFYEVAKRIVEITTDCIIVGHNAAFDYRILQTEFRRLGYDFVRTTLCTVELSERL
IPNKESYSLGKLVRSLGIPVSDRHRASGDALATLKLFKYLLEKDTKKDIITTSVKQDIRL
EMASRHLKILDTLPETLGIFYMHNEEGKVIYIGKHKNIKQQVNRLFTSPSKRDRYLQRHT
YRVTYQETGNELIAALKRLEEIHLNLPKCNRRNPEKEINITYALTSHFNTKGYLYFSIEL
LSTQNEIITTFETKEQAQHFLNQITEEYHLNEVDFNNETVEEYNSRASEVLSKYGLVHRN
VAIVDKGRVIGEKSIILVVDGNIQGYAFFNLNFQLTQLEMLQNLITPLPNSLTNRHLLHA
YLRRKPKVKVLNLSEQKPYHNE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactcgacatagaaaccacaggaggtaaatacaatgaagagggcattacc
gatatcgccatctatcagttcaacgggcacgaaataaccgaccagttcatatcattgata
aaccccgaacgccccattcaagagttcgtcactaaacttacaggcatcaacaacaaaatg
ttgcgcaatgctcctaaattctatgaggttgccaaacgcattgtcgaaattaccaccgat
tgcattatcgtaggtcataatgccgccttcgattatcgcatcttgcaaactgaatttcgt
cgcttaggatacgactttgtccgtacaaccctctgcaccgtagaactctccgagcgactc
attcccaataaagaatcatatagtttaggtaagttagtgcgctccttaggtattcctgta
agcgaccggcatcgcgcttctggtgatgccttggctactctaaaactctttaaataccta
ctcgaaaaggacaccaaaaaggatatcattactacctctgtcaagcaagatattcgttta
gaaatggcttctcgtcatctaaaaatactcgacactctccctgaaacattagggattttt
tatatgcataacgaagaaggtaaggtcatttacatcgggaaacacaaaaatatcaaacaa
caagtaaacaggctcttcacttctccgtccaaacgcgatagatacttgcaacgccatact
tatcgagttacttatcaagaaacaggcaatgaactcatcgctgctttaaaaaggttagaa
gaaatacacctcaacctcccaaaatgcaataggcgaaatcctgaaaaagaaataaatatc
acttatgcacttacttctcactttaatactaagggatatctttatttttcaatagaatta
ttatccactcaaaacgaaattatcactacttttgaaaccaaagaacaagcccagcacttt
ttaaatcaaatcactgaagagtaccatttaaacgaagtagatttcaataacgaaaccgtt
gaggagtataactcgcgcgcctctgaggtgctttcaaaatacggacttgtgcaccgaaac
gtagctattgtagataaaggtagagtaataggcgagaaaagcattattttagtagtcgat
ggcaatattcaaggctatgccttctttaatctgaatttccagcttactcaattagagatg
ttacaaaacctcatcactcctttacccaattcattaacaaaccgtcaccttttgcacgct
tacttgcgacgaaaacccaaagtaaaagtgctaaatctaagcgaacaaaaaccttatcat
aatgaataa
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