Capnocytophaga sp. oral taxon 323: AM608_05200
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Entry
AM608_05200 CDS
T04076
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
col
Capnocytophaga sp. oral taxon 323
Brite
KEGG Orthology (KO) [BR:
col00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
col03032
]
AM608_05200
03400 DNA repair and recombination proteins [BR:
col03400
]
AM608_05200
Enzymes [BR:
col01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AM608_05200
DNA replication proteins [BR:
col03032
]
Prokaryotic type
DNA Topoisomerases
AM608_05200
DNA repair and recombination proteins [BR:
col03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AM608_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALC97082
UniProt:
A0A0M3RII9
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All DBs
Position
1199835..1202312
Genome browser
AA seq
825 aa
AA seq
DB search
MAKNVVIVESPAKAKTIEKFLGKDYKVVSSYGHIVDLPSNELGVDIQHGFKPNYLISNDK
KNLVKELKALTSKAEVVWLASDEDREGEAIAFHLSETLKLKKENTKRIVFNSITKSAIEN
AIKNPRGIDYNLVNAQQARRVLDRLVGYELSPVLWKKIKSGLSAGRVQSVAVRLIVERER
EIQDFKTQSSYRITAEFITSEGKVVKASLPKNFDTQAEAENFLQQNIGAHFKVQSLETKP
AKKMPAPPFTTSTLQQEAARKLHFSVSKTMTVAQRLYESGFITYMRTDSVNLSQEALNTA
KNAIVQLFGAQYSQVRNFATKSKGAQEAHEAIRPTDMSRTSISAEPDQNKLYELIWKRTL
ASQMADAQIERTTVKIEADKHKEHFVANGEMVQFDGFLKVYLESTDDEEEEQEGMLPNLK
KGEALTHRYITATERFTRPLPRYTEASLVKKLEELGIGRPSTYAPTISTIQNRGYVERST
LEGEVRPYQQLTLAGNTIKTQTLSERVGADKGKLVPTDIGSVVNDFLVSHFDTIMDYNFT
AKVENSFDEIAEGTENWTKMLTQFYNHFHPVVENVEKHTGRETGERVLGTDPKSGRPLSV
RLGRYGAMAQIGNPDDAEKPIYASLLAGMSIETITFEEALKLFELPRQLGIVDGKNVEVN
VGRFGPYVRYGDAFISLDKGEDVFSVTLERAKQLIGEKKKADAPIATYQGVEVTKGVGRF
GPFIKWNNTYINVTKKYNFDHLSQQDVEELIEDKLKKESEKVVKEWDEGAIRIEKARWGR
FTLLKGKTKVELPKDTDIATFTKEQALALLTEKEPKPKKATSKKK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaatgtagtgattgtagagtcgcctgccaaggctaaaaccattgaaaagttc
ttaggtaaggactacaaagtagtgtccagttatgggcatattgtcgatttgccctccaat
gaactgggcgtagatatacagcacggttttaaacctaattacctcatctctaacgacaaa
aaaaatcttgtaaaagaactcaaagcactcacgtccaaagccgaagtagtatggctcgct
tccgatgaagaccgtgaaggagaagctattgcgtttcatctttccgaaacactcaaacta
aaaaaggaaaataccaaacgcatcgtttttaactccattaccaaatcggctattgaaaac
gctattaaaaaccctcgtggtatcgattataatctggtgaatgctcagcaagcacgccgt
gtactcgaccgcctcgtgggctatgaactctctcccgtactgtggaaaaaaattaaaagc
ggactctcagcaggacgcgtacagtcggtagcagtacgccttatcgtagaacgcgaacgc
gaaatacaagacttcaaaacgcaatcctcttaccgaattactgccgaatttatcacctca
gaaggcaaagttgtaaaagcctctttgcctaagaatttcgacacacaagccgaagccgaa
aacttcttgcaacagaatatcggagcgcatttcaaagtgcaatcattagaaaccaaacca
gccaagaaaatgcctgcgccccccttcactacttccaccctccaacaagaagccgcacgc
aaactgcacttctcagtaagcaaaacaatgacggtagcccaacgcctctacgaatctggt
tttatcacctatatgcgtaccgatagcgtgaatctttcacaagaagcgctcaacactgcc
aaaaacgctatcgtgcaactcttcggagctcagtacagtcaagtgcgcaatttcgccact
aaaagcaaaggcgcacaagaggcgcacgaagccattcgtcctaccgatatgagtcgtact
tctatctctgctgaacccgatcagaataagctatacgaactgatatggaaacgcaccctt
gcctcacaaatggcagatgctcaaatagagcgcactaccgtaaaaatagaagctgataag
cacaaagaacacttcgtagccaatggcgaaatggtacagttcgatggctttttaaaagtg
tatttagaaagtaccgacgacgaggaagaagaacaagaaggaatgctccccaatctcaaa
aaaggagaagctcttacgcatcgctatattactgctaccgagcgtttcactcgtccacta
cctcgttatactgaggcttcgctggtgaaaaagttagaggaactcggtatcggacgccca
tctacttatgctcctaccatttctacgattcaaaaccgcggatatgtggaacgtagcaca
ctcgaaggtgaagtgcgtccctatcagcaactcacccttgcaggcaatactatcaaaaca
caaacccttagcgaacgagtaggtgccgataaaggtaagctcgttcccaccgatataggt
agtgtagtaaacgattttctcgtctcccatttcgatacgataatggactataatttcact
gccaaagtagaaaatagtttcgacgaaatagccgaaggcactgagaattggacaaagatg
ctcacacagttttataatcattttcaccccgtagtagaaaatgttgaaaagcatacaggt
cgtgaaacaggtgaacgcgtgctgggtaccgaccctaaatcaggtcgccctctcagcgta
cgcttaggtcgttatggagctatggcgcaaatagggaatcccgacgatgccgaaaagcct
atttatgcaagtctattggcaggtatgtctatcgaaacgattacttttgaagaagccctc
aaactcttcgagcttcctcgtcagttaggcattgtcgatggtaagaatgtagaagtgaat
gtagggcgtttcggaccctatgtgcgctacggcgatgctttcatatcacttgataaaggt
gaagacgttttcagtgtaactctcgagcgggctaagcaactcatcggtgagaagaaaaaa
gctgacgctcctattgccacctatcaaggagtggaagttaccaaaggtgtaggtcgtttt
ggtccctttattaagtggaacaacacctatataaacgttaccaaaaagtacaatttcgac
catcttagtcagcaagatgtagaagaacttatagaagataagctcaaaaaagaatcggaa
aaggtagtgaaagaatgggacgaaggagctatccgtatagagaaagcccgctggggacgt
tttaccctcctcaaaggtaaaaccaaagtagaactccccaaagacaccgatatagcaact
ttcaccaaagaacaagctcttgccctcctaaccgagaaagagcctaaacctaaaaaagcc
acttctaaaaagaaataa
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