KEGG   Capnocytophaga sp. oral taxon 323: AM608_07450
Entry
AM608_07450       CDS       T04076                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
col  Capnocytophaga sp. oral taxon 323
Pathway
col03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:col00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AM608_07450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:col03019]
    AM608_07450
Messenger RNA biogenesis [BR:col03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AM608_07450
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 KH-I_KHDC4-BBP DUF4407
Other DBs
NCBI-ProteinID: ALC97485
UniProt: A0A0M4GI47
LinkDB
Position
complement(1723405..1724973)
AA seq 522 aa
MDSTVIISIAVFIIALFIGFAIAKSLEKKNASKIILNAKNEADVLLKNAKAEAENIKKDK
IFQAKEKFLELKAEHEKTISAKDKKMAEAEKRIRDKESQVSNELAQNKRLKDELEKKTEE
ADFRLQTLDKKQEEIDRLHKSQVQQLEVISGLSAEEAKKLLTDSLRSEAQADAMAYIQNT
IEEAKLTAHQEARKIIINTIQRIGTEEAVDNCVSVFNLESDEVKGRIIGREGRNIRALEA
ATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEEE
IVEIGKRTVIDLGIHGLHPELVKCVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNP
KLAKRAGLLHDIGKVPQIESETPHALLGMEWAEKYGEKPEVCNAIGAHHDEIEMTSLLSP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEDAAFTFQGVKKAYAIQAGRELRVIVESER
VTDDKAAELSFNLSQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatagtacagttattataagtattgcagtttttattattgcccttttcatagggttc
gctatcgccaaatcgctggaaaagaagaacgcctctaaaatcattctcaacgctaagaat
gaagccgacgttcttctgaaaaatgctaaagccgaagctgaaaatatcaaaaaagacaag
atattccaagctaaagagaagttccttgaactaaaagctgaacacgaaaaaacaatctcc
gccaaagataaaaaaatggcagaggctgagaagcgtatacgcgataaagagtcgcaagtg
tccaatgaattggcacaaaataagcgcttaaaagatgagttggaaaagaaaacagaagaa
gccgactttcgcttgcaaactctcgacaaaaaacaagaagaaatagaccgcctacacaaa
agtcaggtacaacaattagaggttatttcaggcttgtctgccgaagaagctaagaaacta
ctcaccgattcattgcgcagtgaagcccaagccgacgcgatggcttatatccaaaatacc
attgaggaagccaagctcactgctcaccaagaagcgcgcaaaatcattatcaacaccatt
cagcgtataggcactgaggaagcagtagacaattgcgtatcggtattcaatctcgagtct
gacgaggtgaaaggtcgtatcatcggtcgtgaaggtcgcaatattcgtgccctcgaagca
gctactggggtcgaaatcattgtagacgatacccccgaagcgattatcctctcttgcttc
gactcggtacgtcgcgaaatcgcacgtctttctttgcacaagctcgtaaccgacgggcgt
attcaccctgcacgtattgaagaagtggttgaaaaaactaccaaacaaatagaagaagaa
attgtagaaataggtaaacgcaccgtaattgacctcggtatccacggattgcaccccgag
ttagtaaaatgtgtaggacgtatgaaataccgttcgtcatatgggcagaacctcttgcaa
cactcacgcgaggtagctaagctttgcggagtaatggcagccgagttaggcttgaaccct
aaacttgccaaacgtgccggactcttgcacgacatcggtaaagtaccgcagatagaaagt
gagactcctcacgcactcctcggtatggaatgggcagagaaatacggcgaaaaacccgaa
gtgtgcaatgctatcggggcacaccacgacgagattgagatgacctccttgctttcgcct
attgtacaagtatgcgatgctattagtggagcacgtcccggagcacgtcgccaagtactc
gattcgtatatacaacgtctcaaagacctcgaagatgctgctttcactttccaaggtgtg
aagaaagcctatgcaatccaagcaggtcgtgagttacgtgtaatcgtagaaagcgaaaga
gtaaccgacgataaagccgcagaactatcattcaacttatcgcaaaaaatccaaaccgat
atgacctacccaggtcaagtaaaagtaacggtaatacgtgaaactcgtgctgtgaatatc
gcgaagtaa

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